RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ACPTQ9BZG2 426 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 CXorf21Q9HAI6 301 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 OXSMQ9NWU1 459 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SUCOQ9UBS9 1254 aaKnown RBP20.27■□□□□ 0.84
TRAF4-204ENST00000422344 MCM8Q9UJA3 840 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SH3BGRL2Q9UJC5 107 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 ENTPD4Q9Y227 616 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 MYO7BQ6PIF6 2116 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 GNG14A0A1W2PPG7 69 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 PCDH7O60245 1069 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 ERAL1O75616 437 aaKnown RBP20.26■□□□□ 0.83
TRAF4-204ENST00000422344 CHN1P15882 459 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 PORP16435 677 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-204ENST00000422344 ELAVL4P26378 380 aaKnown RBP20.26■□□□□ 0.83
TRAF4-204ENST00000422344 PLGLB1Q02325 96 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 SLC18A2Q05940 514 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 IMPG1Q17R60 797 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 ZNF750Q32MQ0 723 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 RNFT1Q5M7Z0 435 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 HLA-DQA1Q5Y7H0 255 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 GOLM1Q8NBJ4 401 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 RELTQ969Z4 430 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 TM4SF18Q96CE8 201 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 KLHL29Q96CT2 875 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 WWTR1Q9GZV5 400 aa20.26■□□□□ 0.83
TRAF4-204ENST00000422344 C12orf65Q9H3J6 166 aaKnown RBP20.26■□□□□ 0.83
TRAF4-204ENST00000422344 ANKRD17O75179 2603 aaKnown RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 A0A1W2PS29 197 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 CCL21O00585 134 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 UBFD1O14562 309 aaKnown RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 WISP2O76076 250 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 P04436 131 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 ABOP16442 354 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 CSNK2A2P19784 350 aaPredicted RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 SLC37A1P57057 533 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 HMGCS1Q01581 520 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 SPDYAQ5MJ70 313 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 LIPMQ5VYY2 423 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 SCIMPQ6UWF3 145 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 SLC15A4Q8N697 577 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 ZFP62Q8NB50 900 aaPredicted RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 APOPT1Q96IL0 206 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 PHF12Q96QT6 1004 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 ROPN1BQ9BZX4 212 aaPredicted RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 ROPN1Q9HAT0 212 aaPredicted RBP20.25■□□□□ 0.83
TRAF4-204ENST00000422344 SACM1LQ9NTJ5 587 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 ZNF780BQ9Y6R6 833 aa20.25■□□□□ 0.83
TRAF4-204ENST00000422344 POLQO75417 2590 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 C2orf92A0A1B0GVN3 265 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 PRSS44E7EML9 344 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 ACOT7O00154 380 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 SSTR4P31391 388 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 CA7P43166 264 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 BTKQ06187 659 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 EBPQ15125 230 aaKnown RBP20.24■□□□□ 0.83
TRAF4-204ENST00000422344 MTFR2Q6P444 385 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 BNC2Q6ZN30 1099 aaPredicted RBP20.24■□□□□ 0.83
TRAF4-204ENST00000422344 GK5Q6ZS86 529 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 FAM47EQ6ZV65 393 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 DND1Q8IYX4 353 aaKnown RBP20.24■□□□□ 0.83
TRAF4-204ENST00000422344 TAGAPQ8N103 731 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 MMP21Q8N119 569 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 OR2M7Q8NG81 312 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 CAVIN3Q969G5 261 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 BRINP2Q9C0B6 783 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 PFDN4Q9NQP4 134 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 RYDENQ9NUL5 291 aaKnown RBP20.24■□□□□ 0.83
TRAF4-204ENST00000422344 CES1P1Q9UKY3 287 aa20.24■□□□□ 0.83
TRAF4-204ENST00000422344 ESPNB1AK53 854 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 G3V3Y1 287 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 HS6ST1O60243 411 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 CDC40O60508 579 aaKnown RBP eCLIP20.23■□□□□ 0.839e-6■■■□□ 15.9
TRAF4-204ENST00000422344 ZNF354AO60765 605 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-204ENST00000422344 POU3F2P20265 443 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-204ENST00000422344 CNR1P21554 472 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 TIA1P31483 386 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRAF4-204ENST00000422344 FEN1P39748 380 aaKnown RBP20.23■□□□□ 0.83
TRAF4-204ENST00000422344 FOXA1P55317 472 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 TRABD2AQ86V40 505 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 SPPL2CQ8IUH8 684 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 C10orf107Q8IVU9 208 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 OR7G1Q8NGA0 311 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 C16orf52Q8NHV5 167 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 SPACA9Q96E40 222 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-204ENST00000422344 APIPQ96GX9 242 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 FAM173AQ9BQD7 235 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 DEPPQ9NTK1 212 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 MKS1Q9NXB0 559 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 LGALS13Q9UHV8 139 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 UTS2RQ9UKP6 389 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 DLGAP4Q9Y2H0 992 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 PLLPQ9Y342 182 aa20.23■□□□□ 0.83
TRAF4-204ENST00000422344 SERTM1A2A2V5 107 aa20.22■□□□□ 0.83
TRAF4-204ENST00000422344 NADKO95544 446 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-204ENST00000422344 IL3P08700 152 aa20.22■□□□□ 0.83
TRAF4-204ENST00000422344 CT62P0C5K7 136 aa20.22■□□□□ 0.83
TRAF4-204ENST00000422344 ESRRAP11474 423 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-204ENST00000422344 DRD2P14416 443 aa20.22■□□□□ 0.83
TRAF4-204ENST00000422344 SERPINB3P29508 390 aa20.22■□□□□ 0.83
TRAF4-204ENST00000422344 HSF1Q00613 529 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms