RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 VDRP11473 427 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 B4GALT1P15291 398 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 FOSL2P15408 326 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF18P17022 549 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 PPP2R1AP30153 589 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 BRCC3P46736 316 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 CCR4P51679 360 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 GFPT1Q06210 699 aaPredicted RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 ACTN3Q08043 901 aaPredicted RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 PPP2R5CQ13362 524 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 KRT31Q15323 416 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 SLC22A6Q4U2R8 563 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 CYP4V2Q6ZWL3 525 aaPredicted RBP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 FBXW8Q8N3Y1 598 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 MGARPQ8TDB4 240 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 UBTD2Q8WUN7 234 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 TCP11Q8WWU5 503 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 EEF2KMTQ96G04 330 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 PPP1R16AQ96I34 528 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 FAM213AQ9BRX8 229 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 ABCG4Q9H172 646 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 NT5DC2Q9H857 520 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 AMBNQ9NP70 447 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.8□□□□□ -1.96
LINC00397-201ENST00000422074 VNN3Q9NY84 501 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 OR1A2Q9Y585 309 aa2.8□□□□□ -1.96
LINC00397-201ENST00000422074 IGKV6D-21A0A0A0MT36 114 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 ZSCAN5CA6NGD5 496 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 SLC15A5A6NIM6 579 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 CPNE6O95741 557 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 NUDT17P0C025 328 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 MGMTP16455 207 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 ADARP55265 1226 aaKnown RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 UCP2P55851 309 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 AP1B1Q10567 949 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 PDE7AQ13946 482 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 STX1AQ16623 288 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 DDI2Q5TDH0 399 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 DMKNQ6E0U4 476 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 CAPN13Q6MZZ7 669 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 PRR22Q8IZ63 422 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 SAMD12Q8N8I0 201 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF491Q8N8L2 437 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 BCL2L2Q92843 193 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 PHYHIPLQ96FC7 376 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 EPSTI1Q96J88 318 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 SIGLEC12Q96PQ1 595 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 MCCC1Q96RQ3 725 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 SSX3Q99909 188 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 NTMT1Q9BV86 223 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 DEFB126Q9BYW3 111 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 ZDHHC6Q9H6R6 413 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 SENP1Q9P0U3 644 aa2.79□□□□□ -1.96
LINC00397-201ENST00000422074 FOXA2Q9Y261 457 aaPredicted RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 TDRKHQ9Y2W6 561 aaKnown RBP2.79□□□□□ -1.96
LINC00397-201ENST00000422074 RAI1Q7Z5J4 1906 aaPredicted RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ATP6AP2A0A1C7CYW4 349 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 C5orf51A6NDU8 294 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 E7ENQ6 273 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 H0Y9J4 135 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 KIAA0513O60268 411 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 CSO75390 466 aaKnown RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 OR6A2O95222 327 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 SFTPBP07988 381 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 OR9G9P0C7N8 305 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 CYP3A5P20815 502 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 NSFP46459 744 aaKnown RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 HMGCS2P54868 508 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 HEPACAMQ14CZ8 416 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ETFRF1Q6IPR1 90 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 B3GLCTQ6Y288 498 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF730Q6ZMV8 503 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 NAXDQ8IW45 347 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 SERPINA12Q8IW75 414 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 PEX5LQ8IYB4 626 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 GVQW1Q8N7I0 195 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 SIDT2Q8NBJ9 832 aaKnown RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ICA1LQ8NDH6 482 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 NEK11Q8NG66 645 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ZBED6CLQ96FA7 236 aaPredicted RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 CXorf58Q96LI9 332 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ZNF560Q96MR9 790 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 NAP1L3Q99457 506 aaPredicted RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 GDF3Q9NR23 364 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 DNAJC11Q9NVH1 559 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 AKAP7Q9P0M2 348 aaPredicted RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 HMG20BQ9P0W2 317 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 MOSPD1Q9UJG1 213 aa2.78□□□□□ -1.96
LINC00397-201ENST00000422074 MRTO4Q9UKD2 239 aaKnown RBP2.78□□□□□ -1.96
LINC00397-201ENST00000422074 ABCC9O60706 1549 aa2.78□□□□□ -1.97
LINC00397-201ENST00000422074 FGD5Q6ZNL6 1462 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 KLF18A0A0U1RQI7 1052 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 YJEFN3A6XGL0 299 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 EEF2KO00418 725 aaKnown RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 HDAC3O15379 428 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 TPBGLP0DKB5 382 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms