RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ABCG2Q9UNQ0 655 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 CABIN1Q9Y6J0 2220 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 MN1Q10571 1320 aaPredicted RBP19.7■□□□□ 0.74
GPC1-202ENST00000420138 A0A0A6YYC8 382 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 FITM1A5D6W6 292 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 I3L1I5 382 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 GALR2O43603 387 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 FGF17O60258 216 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 FHP07954 510 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 IST1P53990 364 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 RAB38P57729 211 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SELENOWP63302 87 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 ELOAQ14241 798 aaKnown RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 KCNAB1Q14722 419 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 TSEN54Q7Z6J9 526 aaKnown RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 OR5D16Q8NGK9 328 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 CCDC74AQ96AQ1 378 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 DUSP23Q9BVJ7 150 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 RSPO3Q9BXY4 272 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 MRPS26Q9BYN8 205 aaKnown RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 ENAMQ9NRM1 1142 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 NTMQ9P121 344 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 EI24O14681 340 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SUV39H1O43463 412 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 CHST10O43529 356 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 HMGN2P05204 90 aaKnown RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 OR12D1P0DN82 309 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 CPMP14384 443 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 PAX7P23759 505 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 INAVAQ3KP66 663 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 REEP3Q6NUK4 255 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SLC23A3Q6PIS1 610 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 PLXDC1Q8IUK5 500 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SLC30A8Q8IWU4 369 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SAMD14Q8IZD0 417 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 MIPOL1Q8TD10 442 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 KAT2AQ92830 837 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 MOAP1Q96BY2 351 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 GIMAP5Q96F15 307 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 TMEM19Q96HH6 336 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 DOHHQ9BU89 302 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 YIPF3Q9GZM5 350 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 SPRTNQ9H040 489 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 ADPRHL2Q9NX46 363 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 VNN3Q9NY84 501 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 ANGPT4Q9Y264 503 aa19.69■□□□□ 0.74
GPC1-202ENST00000420138 MAGED1Q9Y5V3 778 aaPredicted RBP19.69■□□□□ 0.74
GPC1-202ENST00000420138 HYKKA2RU49 373 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 EMC8O43402 210 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 LDB3O75112 727 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 BCHEP06276 602 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 ZNF23P17027 643 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 MATN1P21941 496 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 MAGEA8P43361 318 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 PRKAG1P54619 331 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 ID2Q02363 134 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 FAM53BQ14153 422 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 RPS26P11Q5JNZ5 115 aaPredicted RBP19.68■□□□□ 0.74
GPC1-202ENST00000420138 PIWIL3Q7Z3Z3 882 aaKnown RBP19.68■□□□□ 0.74
GPC1-202ENST00000420138 SZRD1Q7Z422 152 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 TMEM179BQ7Z7N9 219 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 OR7G2Q8NG99 324 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 OR56A1Q8NGH5 318 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 C16orf58Q96GQ5 468 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 TPD52L3Q96J77 140 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 R4GN57 208 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 SPACA6W5XKT8 324 aa19.68■□□□□ 0.74
GPC1-202ENST00000420138 PRAMEF25A6NGN4 478 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 YKT6O15498 198 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 SIGLEC6O43699 453 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PGM3O95394 542 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 MAN2A2P49641 1150 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 MERTKQ12866 999 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 LASP1Q14847 261 aaKnown RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 GARNL3Q5VVW2 1013 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 KRT80Q6KB66 452 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 WDR74Q6RFH5 385 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 FKBP9P1Q75LS8 142 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 SIMC1Q8NDZ2 872 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 NUP43Q8NFH3 380 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 OR2I1PQ8NGU4 316 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 ANKRD9Q96BM1 317 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 ADI1Q9BV57 179 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PNPLA3Q9NST1 481 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 DNAAF2Q9NVR5 837 aaKnown RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 ARID1BQ8NFD5 2236 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 DMDP11532 3685 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 RALGAPA1Q6GYQ0 2036 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 hCG_2039718K7EN88 272 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PLOD2O00469 737 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 ARHGAP33O14559 1287 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 NSA2O95478 260 aaKnown RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 GPR75O95800 540 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 CER1O95813 267 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 CLPTM1O96005 669 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 FABP3P05413 133 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PABPC4LP0CB38 370 aaKnown RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 PNLIPP16233 465 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PORP16435 677 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms