RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 FUT7Q11130 342 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 TBL3Q12788 808 aaKnown RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 UNC50Q53HI1 259 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 TCHHL1Q5QJ38 904 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 C10orf62Q5T681 223 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 RNF111Q6ZNA4 994 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 RGS9BPQ6ZS82 235 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 GK5Q6ZS86 529 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 FAM47EQ6ZV65 393 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 TRILQ7L0X0 811 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 COMMD6Q7Z4G1 85 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 SLC22A16Q86VW1 577 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 SRRM1Q8IYB3 904 aaKnown RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 MMP21Q8N119 569 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 SLC15A4Q8N697 577 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF615Q8N8J6 731 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 OR10G3Q8NGC4 313 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 RIT1Q92963 219 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 ATP6V1E2Q96A05 226 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 NTNG2Q96CW9 530 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 TREX2Q9BQ50 279 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 IL1RL2Q9HB29 575 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 PRM3Q9NNZ6 103 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 CNOT11Q9UKZ1 510 aaKnown RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 KIAA1549Q9HCM3 1950 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 OR6C76A6NM76 312 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ACOT7O00154 380 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 OR10H2O60403 315 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 DLX3O60479 287 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 OR4F21O95013 312 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 OTCP00480 354 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SNRPB2P08579 225 aaKnown RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 PTGER4P35408 488 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ARL1P40616 181 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 CLCQ05315 142 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TFF3Q07654 80 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 MGAT2Q10469 447 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 IFT88Q13099 833 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 DUSP8Q13202 625 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 NTRK2Q16620 822 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SGO1Q5FBB7 561 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF678Q5SXM1 525 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 PRAMEF20Q5VT98 475 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SLC22A10Q63ZE4 541 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TMEM64Q6YI46 380 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TRMT10CQ7L0Y3 403 aaKnown RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 FBXW8Q8N3Y1 598 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 FAM109AQ8N4B1 249 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SIMC1Q8NDZ2 872 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SLC22A8Q8TCC7 542 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ADIPOR1Q96A54 375 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SDCCAG3Q96C92 435 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TM4SF18Q96CE8 201 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TMEM237Q96Q45 408 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 GAL3ST4Q96RP7 486 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 HBEGFQ99075 208 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ENKD1Q9H0I2 346 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TP63Q9H3D4 680 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF703Q9H7S9 590 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 WDR41Q9HAD4 459 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 BRF2Q9HAW0 419 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 PNPLA3Q9NST1 481 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TNFRSF10DQ9UBN6 386 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TRPS1Q9UHF7 1281 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SLC12A4Q9UP95 1085 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 PCDHA9Q9Y5H5 950 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 FAM215AQ9Y5M1 114 aa10.16□□□□□ -0.78
SSBP3-206ENST00000420121 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
SSBP3-206ENST00000420121 CELSR1Q9NYQ6 3014 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 MED12Q93074 2177 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 ANKRD17O75179 2603 aaKnown RBP10.15□□□□□ -0.78
SSBP3-206ENST00000420121 IQANK1A0A1B0GTG1 560 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 OR14I1A6ND48 311 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 NPIPA2E9PIF3 369 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 NPIPA3F8WFD2 350 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-206ENST00000420121 AQP7O14520 342 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 DYRK3O43781 588 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 LRATO95237 230 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 P04436 131 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 CPMP14384 443 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 COX6B1P14854 86 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 CHN1P15882 459 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 IGFBP2P18065 325 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 PIK3R1P27986 724 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 HTR6P50406 440 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 XKP51811 444 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 NUP107P57740 925 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 SLC29A2Q14542 456 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 PRICKLE4Q2TBC4 344 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 GXYLT1Q4G148 440 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 CCNYL2Q5T2Q4 361 aa10.15□□□□□ -0.78
SSBP3-206ENST00000420121 TTC19Q6DKK2 380 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-206ENST00000420121 SLC48A1Q6P1K1 146 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms