RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 THUMPD3Q9BV44 507 aaKnown RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 GORASP2Q9H8Y8 452 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 WDR54Q9H977 334 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 HCN3Q9P1Z3 774 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF639Q9UID6 485 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 CCDC187A0A096LP49 1063 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 FAM227AF5H4B4 570 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 PCDH17O14917 1159 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 EMC8O43402 210 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 ASNA1O43681 348 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 HYAL3O43820 417 aaPredicted RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 TIAF1O95411 115 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 GSNP06396 782 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 FTH1P19P0C7X4 201 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 SOX18P35713 384 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 STT3AP46977 705 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 CCT3P49368 545 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRR5P85299 388 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 DUSP2Q05923 314 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 MGAT2Q10469 447 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 SELPLGQ14242 412 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 NKAIN1Q4KMZ8 207 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 MTX3Q5HYI7 312 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 DCAF12Q5T6F0 453 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRAMEF17Q5VTA0 474 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 LCN8Q6JVE9 175 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 MRPL14Q6P1L8 145 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 RAB11FIP2Q7L804 512 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLCO6A1Q86UG4 719 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 FAM120BQ96EK7 910 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 KCTD14Q9BQ13 255 aaPredicted RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 RASSF4Q9H2L5 321 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 C19orf53Q9UNZ5 99 aaPredicted RBP13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 LOXL2Q9Y4K0 774 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 PCDHGA8Q9Y5G5 932 aa13.37□□□□□ -0.27
SHMT1P1-201ENST00000419974 RNF103-CHMP3A0A140T963 221 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 AQP12BA6NM10 295 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 MEN1O00255 615 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 CSO75390 466 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 PDE5AO76074 875 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 CCL4P13236 92 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR1D4P47884 311 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 PLIN5Q00G26 463 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 MS4A2Q01362 244 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 RHAGQ02094 409 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 HSPB3Q12988 150 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 ELOAQ14241 798 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAP7Q14244 749 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 ADRM1Q16186 407 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRICKLE4Q2TBC4 344 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 FHL5Q5TD97 284 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 C1orf146Q5VVC0 180 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 C6orf120Q7Z4R8 191 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZC3H7AQ8IWR0 971 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 AQP12AQ8IXF9 295 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 DTWD1Q8N5C7 304 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR10A6Q8NH74 314 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 WDR36Q8NI36 951 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 COL26A1Q96A83 441 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 CTRCQ99895 268 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC7A5P2Q9GIP4 190 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 APMAPQ9HDC9 416 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC39A1Q9NY26 324 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 TRPC4Q9UBN4 977 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAGEL2Q9UJ55 1249 aa13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 NXT1Q9UKK6 140 aaKnown RBP13.36□□□□□ -0.27
SHMT1P1-201ENST00000419974 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 TCRBV16S1A1N1A0A5B0 115 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 ELOVL7A1L3X0 281 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 C1QTNF9BB2RNN3 333 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 UPK1AO00322 258 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 PLD2O14939 933 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 B4GALT2O60909 372 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 LDB3O75112 727 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 RECKO95980 971 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 GUSBP08236 651 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms