RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 AMER3Q8N944 861 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 CATSPER1Q8NEC5 780 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 C7orf57Q8NEG2 295 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 OR4K14Q8NGD5 310 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 OR5T3Q8NGG3 340 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 OR9A2Q8NGT5 310 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 OR1L3Q8NH93 324 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 PSMA8Q8TAA3 256 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF675Q8TD23 568 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 TANKQ92844 425 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 MMABQ96EY8 250 aaPredicted RBP5.61□□□□□ -1.51
HMGB3-202ENST00000419110 CNRIP1Q96F85 164 aaPredicted RBP5.61□□□□□ -1.51
HMGB3-202ENST00000419110 SLC47A1Q96FL8 570 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 OR1F2PQ96R84 312 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 UGT2B28Q9BY64 529 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 ASPSCR1Q9BZE9 553 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 STRADBQ9C0K7 418 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 IRF2BPLQ9H1B7 796 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 GLIPR2Q9H4G4 154 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 PIF1Q9H611 641 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 TMEM38AQ9H6F2 299 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 TRIM45Q9H8W5 580 aaPredicted RBP5.61□□□□□ -1.51
HMGB3-202ENST00000419110 C11orf16Q9NQ32 467 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 PRTFDC1Q9NRG1 225 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 ENAMQ9NRM1 1142 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 FGF21Q9NSA1 209 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 SIRT3Q9NTG7 399 aaPredicted RBP5.61□□□□□ -1.51
HMGB3-202ENST00000419110 C14orf105Q9NVL8 296 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 SERTAD3Q9UJW9 196 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 RARRES3Q9UL19 164 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 AURKCQ9UQB9 309 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF451Q9Y4E5 1061 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 MAP4K5Q9Y4K4 846 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 MMACHCQ9Y4U1 282 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 V9GYQ6 96 aa5.61□□□□□ -1.51
HMGB3-202ENST00000419110 MUC6Q6W4X9 2439 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 IGHV5-10-1A0A0J9YXX1 117 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 A0A1W2PQM1 296 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CHST10O43529 356 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 HCRTR1O43613 425 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ASNA1O43681 348 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 FGF17O60258 216 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CPNE3O75131 537 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 DEAF1O75398 565 aaPredicted RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 RFPL3O75679 317 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF682O95780 498 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 GPR75O95800 540 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 AGR2O95994 175 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SERPINA1P01009 418 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 IFNA14P01570 189 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ATP1B1P05026 303 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 BCHEP06276 602 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF806P0C7X5 589 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 C8orf89P0DMQ9 161 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 BMP2P12643 396 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ETFAP13804 333 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 PORP16435 677 aaPredicted RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 NT5EP21589 574 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 FEN1P39748 380 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 VHLP40337 213 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CCT3P49368 545 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 MS4A2Q01362 244 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CFHR1Q03591 330 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CHRNB3Q05901 458 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 STX4Q12846 297 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ILKQ13418 452 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 RUNX2Q13950 521 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 VEZF1Q14119 521 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SERTAD2Q14140 314 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SF3A2Q15428 464 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 RGNQ15493 299 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 GRAMD1BQ3KR37 738 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ATAD3BQ5T9A4 648 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 MFSD4BQ5TF39 518 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 GLYATQ6IB77 296 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 FAM180BQ6P0A1 224 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 TNFAIP8L2Q6P589 184 aaPredicted RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 TTLL10Q6ZVT0 673 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 C16orf62Q7Z3J2 963 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 PATL1Q86TB9 770 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 KRT73Q86Y46 540 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SLITRK4Q8IW52 837 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 GALNT12Q8IXK2 581 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ADGRG5Q8IZF4 528 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 VWA5B2Q8N398 1253 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 AGBL5Q8NDL9 886 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 OR52E4Q8NGH9 312 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 BBS10Q8TAM1 723 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SUN3Q8TAQ9 357 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 FBXO30Q8TB52 745 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 RHBDD1Q8TEB9 315 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 LZICQ8WZA0 190 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 PPWD1Q96BP3 646 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 TBC1D20Q96BZ9 403 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SDCCAG3Q96C92 435 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF501Q96CX3 271 aaPredicted RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 DUS3LQ96G46 650 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms