RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 GP1BBP13224 206 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 DDX5P17844 614 aaKnown RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 SDC1P18827 310 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 FEN1P39748 380 aaKnown RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 ASMTP46597 345 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 ERVK-8P63133 956 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF267Q14586 743 aaPredicted RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 C6orf136Q5SQH8 315 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 GALNT12Q8IXK2 581 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 Q8NA96 180 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 OR5L2Q8NGL0 311 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 OR8K3Q8NH51 312 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF721Q8TF20 911 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 HAS2Q92819 552 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 CXorf21Q9HAI6 301 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 SLC35C2Q9NQQ7 365 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 PNPOQ9NVS9 261 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 ERVK-19Q9WJR5 959 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 EIF3LQ9Y262 564 aaKnown RBP12.41□□□□□ -0.42
TMEM248-203ENST00000418375 B3GNT3Q9Y2A9 372 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 DOPEY2Q9Y3R5 2298 aa12.41□□□□□ -0.42
TMEM248-203ENST00000418375 A0A1W2PS29 197 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 OR5H15A6NDH6 313 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 HDAC3O15379 428 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 ATP8B1O43520 1251 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 AGFG2O95081 481 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 WDPCPO95876 746 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 IGKV3-11P04433 115 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 JUNP05412 331 aaKnown RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 PRPS2P11908 318 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 BCKDHAP12694 445 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 TACR1P25103 407 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 MPIP34949 423 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 HK2P52789 917 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 MLF1P58340 268 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 OCRLQ01968 901 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 TLR1Q15399 786 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 SMU1Q2TAY7 513 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF750Q32MQ0 723 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 PRR30Q53SZ7 412 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 FHL5Q5TD97 284 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 RNF111Q6ZNA4 994 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 DGAT2L6Q6ZPD8 337 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 Q6ZS92 163 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 TICAM1Q8IUC6 712 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 BEST3Q8N1M1 668 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 ARMC10Q8N2F6 343 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 SUN3Q8TAQ9 357 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 THAP3Q8WTV1 239 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF681Q96N22 645 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 TSSK3Q96PN8 268 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 PSMG3-AS1Q96PY0 264 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 BBS4Q96RK4 519 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 UTP23Q9BRU9 249 aaKnown RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 NUF2Q9BZD4 464 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 BRINP2Q9C0B6 783 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF223Q9UK11 482 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-203ENST00000418375 TNRC6AQ8NDV7 1962 aaKnown RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 OR6C76A6NM76 312 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 TRPC5OSA6NMA1 111 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 GABRR3A8MPY1 467 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 KITP10721 976 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 NTSP30990 170 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 HPCAL1P37235 193 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 RPL3P39023 403 aaKnown RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 RNF4P78317 190 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 OC90Q02509 493 aaPredicted RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 EMX2Q04743 252 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 MAP4K2Q12851 820 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 IL23RQ5VWK5 629 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 SLC29A4Q7RTT9 530 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 CCDC116Q8IYX3 515 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 LRRC34Q8IZ02 419 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 VWA5B2Q8N398 1253 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 LIX1Q8N485 282 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 HORMAD2Q8N7B1 307 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF321PQ8N8H1 164 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 OR7G1Q8NGA0 311 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 DOK4Q8TEW6 326 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 PPCDCQ96CD2 204 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF764Q96H86 408 aaPredicted RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 EGLN2Q96KS0 407 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 NPAS2Q99743 824 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 C1orf50Q9BV19 199 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 REEP4Q9H6H4 257 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 MEAF6Q9HAF1 191 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 TAS2R7Q9NYW3 318 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms