RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FBXO45P0C2W1 286 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 RFPL3SP0C7P2 107 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 CHN1P15882 459 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 CNTFP26441 200 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 TLX1P31314 330 aaPredicted RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 HTR6P50406 440 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 TBL3Q12788 808 aaKnown RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 DUSP8Q13202 625 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 HYAL4Q2M3T9 481 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 GLE1Q53GS7 698 aaKnown RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 UNC50Q53HI1 259 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 NDUFAF5Q5TEU4 345 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 FAM47EQ6ZV65 393 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 TRILQ7L0X0 811 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 COMMD6Q7Z4G1 85 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SLC22A16Q86VW1 577 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 FAM109AQ8N4B1 249 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SIMC1Q8NDZ2 872 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SLC22A8Q8TCC7 542 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 RIT1Q92963 219 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 ART5Q96L15 291 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 PELOQ9BRX2 385 aaKnown RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 IL1RL2Q9HB29 575 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SPRR3Q9UBC9 169 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 CES1P1Q9UKY3 287 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 CNOT11Q9UKZ1 510 aaKnown RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 FAM215AQ9Y5M1 114 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 DOCK7Q96N67 2140 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 ACOT7O00154 380 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 DLX3O60479 287 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 SLC35E2P0CK97 266 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 COX6B1P14854 86 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 NUP107P57740 925 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 FUT7Q11130 342 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 BICRALQ6AI39 1079 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 RTL6Q6ICC9 239 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 FAM180BQ6P0A1 224 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 MILR1Q7Z6M3 343 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 FBXW8Q8N3Y1 598 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 OR5M9Q8NGP3 310 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 TRPC4APQ8TEL6 797 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 CHST11Q9NPF2 352 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 NPDC1Q9NQX5 325 aaPredicted RBP13.9□□□□□ -0.18
UBXN4-203ENST00000416538 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 ADAM29Q9UKF5 820 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 SLC12A4Q9UP95 1085 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 RNF6Q9Y252 685 aa13.9□□□□□ -0.18
UBXN4-203ENST00000416538 A0A1B0GVC2 190 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ATP6AP2A0A1C7CYW4 349 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ATP6AP2O75787 350 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 OTCP00480 354 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 P04436 131 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 RHOXF2BP0C7M4 288 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 CPMP14384 443 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 S1PR1P21453 382 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 GALNSP34059 522 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 PTGER4P35408 488 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 HSD17B3P37058 310 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 CLCQ05315 142 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 TFF3Q07654 80 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 MGAT2Q10469 447 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 IFT88Q13099 833 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 NTRK2Q16620 822 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ZNF678Q5SXM1 525 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 TTC19Q6DKK2 380 aaPredicted RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 TIFABQ6ZNK6 161 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 SLC29A4Q7RTT9 530 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 CCDC71Q8IV32 467 aaPredicted RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 GALNT12Q8IXK2 581 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 C1orf52Q8N6N3 182 aaKnown RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 FAM13CQ8NE31 585 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 OR5M3Q8NGP4 307 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 SELENOMQ8WWX9 145 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ADIPOR1Q96A54 375 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 RHOXF2Q9BQY4 288 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 SLC6A15Q9H2J7 730 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ELOVL6Q9H5J4 265 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 WDR41Q9HAD4 459 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 EMCNQ9ULC0 261 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 F8P00451 2351 aa13.89□□□□□ -0.19
UBXN4-203ENST00000416538 ANKRD17O75179 2603 aaKnown RBP13.89□□□□□ -0.19
UBXN4-203ENST00000416538 IQANK1A0A1B0GTG1 560 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 NKX2-6A6NCS4 301 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 OR6C76A6NM76 312 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 FAM90A27PA6NNH2 459 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 MANBAO00462 879 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 DYRK3O43781 588 aa13.88□□□□□ -0.19
UBXN4-203ENST00000416538 GPX3P22352 226 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms