RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 SPATA6LQ8N4H0 392 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 SPPL2AQ8TCT8 520 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 ZPLD1Q8TCW7 415 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 SMPDL3BQ92485 455 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 RGMAQ96B86 450 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 YIPF4Q9BSR8 244 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 CD274Q9NZQ7 290 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.16
DDX56-202ENST00000415758 TSC22D4Q9Y3Q8 395 aa14.08□□□□□ -0.16
DDX56-202ENST00000415758 A0A1W2PPR1 153 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 E7ESA3 106 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 SAP18O00422 153 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 TP73O15350 636 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 CCNT2O60583 730 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 LRATO95237 230 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 AGFG1P52594 562 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 HNRNPH2P55795 449 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 PCBP2Q15366 365 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX56-202ENST00000415758 MRM1Q6IN84 353 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 PACS2Q86VP3 889 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 ANKMY2Q8IV38 441 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 RIT1Q92963 219 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 ISL2Q96A47 359 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 TSPAN17Q96FV3 270 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 RILPQ96NA2 401 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 GNRHR2Q96P88 292 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 TRIB1Q96RU8 372 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 SORBS1Q9BX66 1292 aaKnown RBP14.07□□□□□ -0.16
DDX56-202ENST00000415758 UGT2B28Q9BY64 529 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 OR51B5Q9H339 312 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 SNX15Q9NRS6 342 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 CAMK2AQ9UQM7 478 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 SLC6A5Q9Y345 797 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 ASB4Q9Y574 426 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 NPFFR2Q9Y5X5 522 aa14.07□□□□□ -0.16
DDX56-202ENST00000415758 C2orf92A0A1B0GVN3 265 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 EEF1E1-BLOC1S5C9J1V9 151 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 PLPP1O14494 284 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 EEF1E1O43324 174 aaKnown RBP14.06□□□□□ -0.16
DDX56-202ENST00000415758 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 SLC35E2BP0CK96 405 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 SLC35E2P0CK97 266 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 PCNAP12004 261 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 CPN1P15169 458 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 BUD31P41223 144 aaPredicted RBP14.06□□□□□ -0.16
DDX56-202ENST00000415758 PIK3CBP42338 1070 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 CASP3P42574 277 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 FBXW4P57775 412 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 BICRALQ6AI39 1079 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 TIGD3Q6B0B8 471 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 GRHL2Q6ISB3 625 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 HUS1BQ8NHY5 278 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 DOK4Q8TEW6 326 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 ABTB1Q969K4 478 aaPredicted RBP14.06□□□□□ -0.16
DDX56-202ENST00000415758 TMEM41AQ96HV5 264 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 ZFP3Q96NJ6 502 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 CENPKQ9BS16 269 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 ZNF717Q9BY31 904 aaPredicted RBP14.06□□□□□ -0.16
DDX56-202ENST00000415758 CAB39LQ9H9S4 337 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 SMYD2Q9NRG4 433 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 ARID1AO14497 2285 aa14.06□□□□□ -0.16
DDX56-202ENST00000415758 EXPH5Q8NEV8 1989 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 WASHC1A8K0Z3 465 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 ARHGEF9O43307 516 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 OR10H2O60403 315 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 CDH16O75309 829 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 PRKRAO75569 313 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 ACTL6AO96019 429 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 TMIGD3P0DMS9 266 aaPredicted RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 STMN1P16949 149 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 TMED10P49755 219 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 RAP1GDS1P52306 607 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 NAGLUP54802 743 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 RPP38P78345 283 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 FUT7Q11130 342 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 PDIA2Q13087 525 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 RCAN2Q14206 197 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 FASTKD3Q14CZ7 662 aaKnown RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 ZKSCAN8Q15776 578 aaPredicted RBP14.05□□□□□ -0.16
DDX56-202ENST00000415758 EIPR1Q53HC9 387 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 DCST1Q5T197 706 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 TMEM81Q6P7N7 255 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 TMEM64Q6YI46 380 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 TAOK1Q7L7X3 1001 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 ADGRE4PQ86SQ3 457 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 PRIMA1Q86XR5 153 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 LRRC75A-AS1Q8N1F1 130 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 C9orf106Q8NAJ2 232 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 C17orf47Q8NEP4 570 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 ADIPOR1Q96A54 375 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 COX4I2Q96KJ9 171 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 GPR22Q99680 433 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
DDX56-202ENST00000415758 SFXN3Q9BWM7 321 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms