RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
UBA3-203ENST00000415609 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
UBA3-203ENST00000415609 GPC6Q9Y625 555 aaPredicted RBP11.69□□□□□ -0.54
UBA3-203ENST00000415609 REV3LO60673 3130 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 A0A1W2PR48 441 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 PRR19A6NJB7 356 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ISM1B1AKI9 464 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 M0R3H8 397 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 RFXAPO00287 272 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 PGRMC2O15173 223 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 KDM1AO60341 852 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 CBFA2T3O75081 653 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 UGT2B17O75795 530 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 OXSR1O95747 527 aaPredicted RBP11.68□□□□□ -0.54
UBA3-203ENST00000415609 AIFM1O95831 613 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 PTHP01270 115 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 OSMP13725 252 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 GADD45AP24522 165 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
UBA3-203ENST00000415609 CERS1P27544 350 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 NTSR1P30989 418 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 AHRP35869 848 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 CRISP3P54108 245 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 RAB15P59190 212 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 RAB8AP61006 207 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ZNF750Q32MQ0 723 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 TMEM196Q5HYL7 178 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ATAT1Q5SQI0 421 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 FAM92BQ6ZTR7 304 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 FAM46DQ8NEK8 389 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 OR2L5Q8NG80 312 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 OR2M4Q96R27 311 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 WFDC6Q9BQY6 131 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ROGDIQ9GZN7 287 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 DCSTAMPQ9H295 470 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ARMC7Q9H6L4 198 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ZBTB20Q9HC78 741 aaPredicted RBP11.68□□□□□ -0.54
UBA3-203ENST00000415609 PRDM7Q9NQW5 492 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 MGAT4BQ9UQ53 548 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 PMF1-BGLAPU3KQ54 211 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 DSPPQ9NZW4 1301 aa11.68□□□□□ -0.54
UBA3-203ENST00000415609 PRSS38A1L453 326 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SH3D21A4FU49 640 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 EFCAB10A6NFE3 127 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 H3BN98 237 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 TLR4O00206 839 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 PRICKLE3O43900 615 aaPredicted RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 SULT1C4O75897 302 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 C8orf89P0DMQ9 161 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 ANXA11P50995 505 aaKnown RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 PSMD7P51665 324 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SMIM11AP58511 58 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 PPP2CBP62714 309 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 PPP2CAP67775 309 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 LASP1Q14847 261 aaKnown RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 TMEM107Q6UX40 140 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 OR6Q1Q8NGQ2 317 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 BBS10Q8TAM1 723 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 CHPT1Q8WUD6 406 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 DHRS1Q96LJ7 313 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 IL4I1Q96RQ9 567 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 HEBP2Q9Y5Z4 205 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 COLEC10Q9Y6Z7 277 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 CNOT3O75175 753 aaKnown RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 HNRNPCP07910 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBA3-203ENST00000415609 IGFBP1P08833 259 aaPredicted RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 HOXB2P14652 356 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 FEN1P39748 380 aaKnown RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 CLDN2P57739 230 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 DUSP2Q05923 314 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 PIN1Q13526 163 aaPredicted RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 INAQ16352 499 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 FBXO43Q4G163 708 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 ARMCX4Q5H9R4 360 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 TMEM64Q6YI46 380 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SLC46A3Q7Z3Q1 461 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 ZNF554Q86TJ5 538 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 COMTD1Q86VU5 262 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 OR4E2Q8NGC2 313 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 LCN9Q8WX39 176 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 CNRIP1Q96F85 164 aaPredicted RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 CRELD1Q96HD1 420 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SPATA5L1Q9BVQ7 753 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 BTBD2Q9BX70 525 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 SLIRPQ9GZT3 109 aaKnown RBP11.67□□□□□ -0.54
UBA3-203ENST00000415609 KIR3DX1Q9H7L2 352 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 REV1Q9UBZ9 1251 aa11.67□□□□□ -0.54
UBA3-203ENST00000415609 OSGIN1Q9UJX0 560 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms