RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CAPN14A8MX76 684 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 CCDC188H7C350 402 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 GNB5O14775 395 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 EEDO75530 441 aaKnown RBP17.71■□□□□ 0.43
UBXN4-202ENST00000415164 EPPINO95925 133 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 C1QAP02745 245 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 GBAP04062 536 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 GNG11P61952 73 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 CRYZQ08257 329 aaKnown RBP17.71■□□□□ 0.43
UBXN4-202ENST00000415164 DLG1Q12959 904 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 RPS6KA2Q15349 733 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 ZKSCAN8Q15776 578 aaPredicted RBP17.71■□□□□ 0.43
UBXN4-202ENST00000415164 SPRED3Q2MJR0 410 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 TBCELQ5QJ74 424 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 C6orf163Q5TEZ5 329 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 C3orf62Q6ZUJ4 267 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 PM20D2Q8IYS1 436 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 ZCCHC7Q8N3Z6 543 aaKnown RBP17.71■□□□□ 0.43
UBXN4-202ENST00000415164 UCN3Q969E3 161 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 GNRHR2Q96P88 292 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 YIPF4Q9BSR8 244 aa17.71■□□□□ 0.43
UBXN4-202ENST00000415164 TEX10Q9NXF1 929 aaPredicted RBP17.71■□□□□ 0.43
UBXN4-202ENST00000415164 MAP1AP78559 2803 aaPredicted RBP17.71■□□□□ 0.42
UBXN4-202ENST00000415164 TMPRSS11DO60235 418 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 KERAO60938 352 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 TRIM3O75382 744 aaPredicted RBP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 AIFM1O95831 613 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 RAF1P04049 648 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 LTA4HP09960 611 aaKnown RBP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 FAM58BPP0C7Q3 252 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 GFAPP14136 432 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 KRT15P19012 456 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 CEACAM8P31997 349 aaPredicted RBP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 ZNF136P52737 540 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 NRG3P56975 720 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 ADAM8P78325 824 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 SETDB1Q15047 1291 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 POU4F3Q15319 338 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 CPSF6Q16630 551 aaKnown RBP eCLIP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 GRTP1Q5TC63 336 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 PAMR1Q6UXH9 720 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 ISCA2Q86U28 154 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 PACS2Q86VP3 889 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 ATOH8Q96SQ7 321 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 SNX15Q9NRS6 342 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 ZNF629Q9UEG4 869 aaPredicted RBP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 FOXD3Q9UJU5 478 aaPredicted RBP17.7■□□□□ 0.42
UBXN4-202ENST00000415164 NPFFR2Q9Y5X5 522 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
UBXN4-202ENST00000415164 NCKAP5O14513 1909 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 A0A1W2PR48 441 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 A0A1W2PS29 197 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 FAM159BA6NKW6 160 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 CLPSP04118 112 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 SLC35E2BP0CK96 405 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 TIMP3P35625 211 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 PIK3CBP42338 1070 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 PIK3CGP48736 1102 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 TMED10P49755 219 aaKnown RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 CDK9P50750 372 aaKnown RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 RPP38P78345 283 aaKnown RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 E2F2Q14209 437 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 SF3B4Q15427 424 aaKnown RBP eCLIP17.69■□□□□ 0.421e-8■■■■□ 23
UBXN4-202ENST00000415164 EIPR1Q53HC9 387 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 WIPI1Q5MNZ9 446 aaPredicted RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 Q71RC1 249 aaPredicted RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 KIF18BQ86Y91 864 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 GALNT12Q8IXK2 581 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 SPPL2AQ8TCT8 520 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 UBTD2Q8WUN7 234 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 KCTD4Q8WVF5 259 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 NXNL1Q96CM4 212 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 REPS1Q96D71 796 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 MRRFQ96E11 262 aaKnown RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 NAPGQ99747 312 aaPredicted RBP17.69■□□□□ 0.42
UBXN4-202ENST00000415164 C15orf41Q9Y2V0 281 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 ASB4Q9Y574 426 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 PCDHGA11Q9Y5H2 935 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 ABCA4P78363 2273 aa17.69■□□□□ 0.42
UBXN4-202ENST00000415164 LRRC14BA6NHZ5 514 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 SYCE1LA8MT33 242 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 SNX4O95219 450 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 NT5EP21589 574 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 PIK3R1P27986 724 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 CRABP2P29373 138 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 NEK2P51955 445 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 IRF9Q00978 393 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 NNATQ16517 81 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 PFKFB4Q16877 469 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 DEFB113Q30KQ7 82 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 KBTBD12Q3ZCT8 623 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 DCST1Q5T197 706 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 NSUN5P2Q63ZY6 315 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 CAMKMTQ7Z624 323 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 NUDT13Q86X67 352 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 ABTB1Q969K4 478 aaPredicted RBP17.68■□□□□ 0.42
UBXN4-202ENST00000415164 UGT2B28Q9BY64 529 aa17.68■□□□□ 0.42
UBXN4-202ENST00000415164 METTL7AQ9H8H3 244 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms