RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PHC2Q8IXK0 858 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 GDPD1Q8N9F7 314 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 OR7G1Q8NGA0 311 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 CD99L2Q8TCZ2 262 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SLC7A6Q92536 515 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TM4SF18Q96CE8 201 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 DTD2Q96FN9 168 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TMEM19Q96HH6 336 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TSSK6Q9BXA6 273 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SMG9Q9H0W8 520 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 LINC00597Q9H2U6 94 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SYNDIG1Q9H7V2 258 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 ABCB9Q9NP78 766 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 DOCK6Q96HP0 2047 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 A0A1W2PRQ8 180 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 ANKDD1BA6NHY2 528 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 HEPACAM2A8MVW5 462 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 H3BN98 237 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 MYL12BO14950 172 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 PDPK1O15530 556 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 APOL3O95236 402 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 RAB36O95755 333 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 CSF3P09919 207 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 MSL3P1P0C860 447 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 ACADMP11310 421 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 KIR2DL3P43628 341 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 RPS26P62854 115 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 EFNB1P98172 346 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TSTA3Q13630 321 aaPredicted RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 TRIM60Q495X7 471 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 GLYR1Q49A26 553 aaPredicted RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 PRAMEF14Q5SWL7 426 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 PRAMEF13Q5VWM6 474 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 LIPKQ5VXJ0 399 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 C6orf120Q7Z4R8 191 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 RBM45Q8IUH3 476 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 PITHD1Q9GZP4 211 aaPredicted RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 SLC22A4Q9H015 551 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SPNS1Q9H2V7 528 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 NT5DC2Q9H857 520 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 PELI2Q9HAT8 420 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 SAGE1Q9NXZ1 904 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TESQ9UGI8 421 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 ABT1Q9ULW3 272 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 CCL26Q9Y258 94 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 CKAP5Q14008 2032 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 B4DXG7 233 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 PLA2G10O15496 165 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 PQBP1O60828 265 aaKnown RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 CDRT1O95170 752 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 TP53P04637 393 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 C8AP07357 584 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 KELP23276 732 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 PPM1AP35813 382 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 HSD17B2P37059 387 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 MAPK12P53778 367 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 CDK5Q00535 292 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 MEF2AQ02078 507 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 TARDBPQ13148 414 aaKnown RBP eCLIP9.27□□□□□ -0.93
CD44-206ENST00000415148 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
CD44-206ENST00000415148 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 KHDRBS2Q5VWX1 349 aaKnown RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 IQCF1Q8N6M8 205 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 TCEANCQ8N8B7 351 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 NLGN4YQ8NFZ3 816 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 OR2L2Q8NH16 312 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 CREB3L4Q8TEY5 395 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 SMPDL3AQ92484 453 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 RAD51AP1Q96B01 352 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 OTUB2Q96DC9 234 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 CLIP3Q96DZ5 547 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 CFHR5Q9BXR6 569 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 ACSS1Q9NUB1 689 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 TXNL4BQ9NX01 149 aaKnown RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 MARK1Q9P0L2 795 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 SNTNA6NMZ2 147 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 HMGN4O00479 90 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 PLPP1O14494 284 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 AKR7A2O43488 359 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 VEGFDO43915 354 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 ALX3O95076 343 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 PAPLNO95428 1278 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 SOD1P00441 154 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 BSGP35613 385 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 SNRPD2P62316 118 aaKnown RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 DPTQ07507 201 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 ARHGAP19Q14CB8 494 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 DUSP6Q16828 381 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 PLK5Q496M5 336 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 C3orf38Q5JPI3 329 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 TNFAIP8L2Q6P589 184 aaPredicted RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 RFPL4BQ6ZWI9 263 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 USP30Q70CQ3 517 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 ANKRD33Q7Z3H0 272 aa9.27□□□□□ -0.93
CD44-206ENST00000415148 TRMT11Q7Z4G4 463 aaKnown RBP9.27□□□□□ -0.93
CD44-206ENST00000415148 NOXA1Q86UR1 476 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms