RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CNR1P21554 472 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SERPINB3P29508 390 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 FEN1P39748 380 aaKnown RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 RFC3P40938 356 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 HTR6P50406 440 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SLC37A1P57057 533 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 HMGCS1Q01581 520 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 HEPACAMQ14CZ8 416 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 FAM219BQ5XKK7 198 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SLC48A1Q6P1K1 146 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 MTFR2Q6P444 385 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 PAOXQ6QHF9 649 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SCIMPQ6UWF3 145 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 BNC2Q6ZN30 1099 aaPredicted RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 GK5Q6ZS86 529 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 TRABD2AQ86V40 505 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 C10orf107Q8IVU9 208 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SRRM1Q8IYB3 904 aaKnown RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 DND1Q8IYX4 353 aaKnown RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 TAGAPQ8N103 731 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 ZFP62Q8NB50 900 aaPredicted RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 GOLM1Q8NBJ4 401 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 CAVIN3Q969G5 261 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 RELTQ969Z4 430 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 APOPT1Q96IL0 206 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 SMC6Q96SB8 1091 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 BRINP2Q9C0B6 783 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 WWTR1Q9GZV5 400 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 C12orf65Q9H3J6 166 aaKnown RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 RRAGDQ9NQL2 400 aaPredicted RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 SACM1LQ9NTJ5 587 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 UTS2RQ9UKP6 389 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 DLGAP4Q9Y2H0 992 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 PLLPQ9Y342 182 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 UTP20O75691 2785 aaKnown RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 FREM3P0C091 2139 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 A0A1W2PS29 197 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SERTM1A2A2V5 107 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 CAPN14A8MX76 684 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 UBFD1O14562 309 aaKnown RBP10.36□□□□□ -0.75
RFFL-204ENST00000414419 HS6ST1O60243 411 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 CHEK2O96017 543 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 ANXA4P09525 319 aaPredicted RBP10.36□□□□□ -0.75
RFFL-204ENST00000414419 RNF224P0DH78 156 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 UROSP10746 265 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 DRD2P14416 443 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SSTR4P31391 388 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
RFFL-204ENST00000414419 CA7P43166 264 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 GSTM5P46439 218 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 FOXA1P55317 472 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 NRG3P56975 720 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 FUT7Q11130 342 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SLC22A10Q63ZE4 541 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 RGS9BPQ6ZS82 235 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SLC22A16Q86VW1 577 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SPPL2CQ8IUH8 684 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SIAH3Q8IW03 269 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 HOMEZQ8IX15 550 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SAMD14Q8IZD0 417 aaPredicted RBP10.36□□□□□ -0.75
RFFL-204ENST00000414419 BANPQ8N9N5 519 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 FAM13CQ8NE31 585 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 OR2M7Q8NG81 312 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 OR7G1Q8NGA0 311 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 C16orf52Q8NHV5 167 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 CDC26Q8NHZ8 85 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SPACA9Q96E40 222 aaPredicted RBP10.36□□□□□ -0.75
RFFL-204ENST00000414419 APIPQ96GX9 242 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 FAM173AQ9BQD7 235 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 PARD6BQ9BYG5 372 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 SHCBP1LQ9BZQ2 653 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 OR10A5Q9H207 317 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 GIMAP4Q9NUV9 329 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 MKS1Q9NXB0 559 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 BCAP29Q9UHQ4 241 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 LGALS13Q9UHV8 139 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 CES1P1Q9UKY3 287 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 CFL2Q9Y281 166 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 DOPEY1Q5JWR5 2465 aa10.36□□□□□ -0.75
RFFL-204ENST00000414419 G3V3Y1 287 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 PRRG2O14669 202 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 TP53I11O14683 189 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 ZNF354AO60765 605 aaPredicted RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 ZG16O60844 167 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 SPAG7O75391 227 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 WISP2O76076 250 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 ATP1B1P05026 303 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 TUBBP07437 444 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 IL3P08700 152 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 NR0B1P51843 470 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 PPIAP62937 165 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 PCLAFQ15004 111 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 EBPQ15125 230 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 GALNT18Q6P9A2 607 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 MAMDC2Q7Z304 686 aaPredicted RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 MMP21Q8N119 569 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms