RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 HAS2Q92819 552 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 PPCDCQ96CD2 204 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 CTHRC1Q96CG8 243 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 STMN3Q9NZ72 180 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 ABI3Q9P2A4 366 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 DOCK10Q96BY6 2186 aa15.33■□□□□ 0.04
LINC00398-201ENST00000414407 GABRR3A8MPY1 467 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
LINC00398-201ENST00000414407 IFI6P09912 130 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 EPHA3P29320 983 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 NTSP30990 170 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CLDN8P56748 225 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 SLC37A1P57057 533 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 MLF1P58340 268 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 MGAT2Q10469 447 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 PTGR1Q14914 329 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 PRSS53Q2L4Q9 553 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 B3GNTL1Q67FW5 361 aaPredicted RBP15.32■□□□□ 0.04
LINC00398-201ENST00000414407 EPGNQ6UW88 154 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 MAVSQ7Z434 540 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 RIMKLAQ8IXN7 391 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CCDC116Q8IYX3 515 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 VWA5B2Q8N398 1253 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 ZNF321PQ8N8H1 164 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CEP70Q8NHQ1 597 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CLHC1Q8NHS4 586 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 SUN3Q8TAQ9 357 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 NUBPLQ8TB37 319 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 STON2Q8WXE9 905 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 GFM2Q969S9 779 aaKnown RBP15.32■□□□□ 0.04
LINC00398-201ENST00000414407 BBS4Q96RK4 519 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 PRPF18Q99633 342 aaKnown RBP15.32■□□□□ 0.04
LINC00398-201ENST00000414407 NPAS2Q99743 824 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CNPPD1Q9BV87 410 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 WDR55Q9H6Y2 383 aaPredicted RBP15.32■□□□□ 0.04
LINC00398-201ENST00000414407 MAT2BQ9NZL9 334 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 ZNF639Q9UID6 485 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 ERVK-19Q9WJR5 959 aa15.32■□□□□ 0.04
LINC00398-201ENST00000414407 DYTNA2CJ06 578 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 HRKO00198 91 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 FCHO1O14526 889 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 SCAMP2O15127 329 aaKnown RBP15.31■□□□□ 0.04
LINC00398-201ENST00000414407 AKAP10O43572 662 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 BCAS2O75934 225 aaPredicted RBP15.31■□□□□ 0.04
LINC00398-201ENST00000414407 LRATO95237 230 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 CT62P0C5K7 136 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 S1PR1P21453 382 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 FRKP42685 505 aaPredicted RBP15.31■□□□□ 0.04
LINC00398-201ENST00000414407 DIO3P55073 304 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 RNF4P78317 190 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 DUSP2Q05923 314 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 KLRB1Q12918 225 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 SLC9B1Q4ZJI4 515 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 ZNF628Q5EBL2 1059 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 FAM180BQ6P0A1 224 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 RNF111Q6ZNA4 994 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 LINC00696Q6ZRV3 163 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 FAM47EQ6ZV65 393 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 CAMKMTQ7Z624 323 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 COQ8BQ96D53 544 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 CDCP1Q9H5V8 836 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 ZBTB20Q9HC78 741 aaPredicted RBP15.31■□□□□ 0.04
LINC00398-201ENST00000414407 ACSS1Q9NUB1 689 aaPredicted RBP15.31■□□□□ 0.04
LINC00398-201ENST00000414407 ATAD3AQ9NVI7 634 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 MYOTQ9UBF9 498 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 CFL2Q9Y281 166 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 PIEZO2Q9H5I5 2752 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 FAM208BQ5VWN6 2430 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 ZFYVE26Q68DK2 2539 aa15.31■□□□□ 0.04
LINC00398-201ENST00000414407 GOLGA8QA0A0J9YX86 632 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 GOLGA8OA6NCC3 632 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 TMEM200CA6NKL6 621 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 TCP11X1B4DZS4 312 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 GOLGA8NF8WBI6 632 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 PDPK1O15530 556 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 PLOD3O60568 738 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 CLPSP04118 112 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 TRHRP34981 398 aaPredicted RBP15.3■□□□□ 0.04
LINC00398-201ENST00000414407 SOX18P35713 384 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 NCBP2P52298 156 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00398-201ENST00000414407 SLC29A4Q7RTT9 530 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 C9orf40Q8IXQ3 194 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 RBMXL3Q8N7X1 1067 aaKnown RBP15.3■□□□□ 0.04
LINC00398-201ENST00000414407 ZNF615Q8N8J6 731 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 ZFP28Q8NHY6 868 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 CHD6Q8TD26 2715 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 ZBED6CLQ96FA7 236 aaPredicted RBP15.3■□□□□ 0.04
LINC00398-201ENST00000414407 AMDHD1Q96NU7 426 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 BRINP2Q9C0B6 783 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 OR10A5Q9H207 317 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 AIG1Q9NVV5 245 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 SH3BP4Q9P0V3 963 aa15.3■□□□□ 0.04
LINC00398-201ENST00000414407 YARS2Q9Y2Z4 477 aaKnown RBP15.3■□□□□ 0.04
LINC00398-201ENST00000414407 A0A087WV62 115 aa15.29■□□□□ 0.04
LINC00398-201ENST00000414407 PLOD2O00469 737 aa15.29■□□□□ 0.04
LINC00398-201ENST00000414407 ANKRD28O15084 1053 aa15.29■□□□□ 0.04
LINC00398-201ENST00000414407 PRKNO60260 465 aaPredicted RBP15.29■□□□□ 0.04
LINC00398-201ENST00000414407 DIAPH2O60879 1101 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms