RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TMEM120BA0PK00 339 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 MAN1A2O60476 641 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 IGKV3-11P04433 115 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 ATP1B1P05026 303 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 DHRS4L1P0CG22 281 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 DDCP20711 480 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 ASMTP46597 345 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 SLC1A6P48664 564 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 HK2P52789 917 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 NRG3P56975 720 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 MAP4K2Q12851 820 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 MAD2L1Q13257 205 aaPredicted RBP13.65□□□□□ -0.22
CHD1-202ENST00000414220 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 ATG16L1Q676U5 607 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 VWA5B2Q8N398 1253 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 MDS2Q8NDY4 140 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 UCN3Q969E3 161 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
CHD1-202ENST00000414220 ZBTB9Q96C00 473 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 C19orf60Q96EN9 201 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 C11orf24Q96F05 449 aaPredicted RBP13.65□□□□□ -0.22
CHD1-202ENST00000414220 SCMH1Q96GD3 660 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 SGCZQ96LD1 299 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 SIGLEC12Q96PQ1 595 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 OR10A5Q9H207 317 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 TNFRSF12AQ9NP84 129 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 SLC35C2Q9NQQ7 365 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 PRODH2Q9UF12 536 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 BCAP29Q9UHQ4 241 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 RAP2CQ9Y3L5 183 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 PIP5K1BO14986 540 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 NEURL1O76050 574 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 SLITRK5O94991 958 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 EDN3P14138 238 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 NTSP30990 170 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 RPL3P39023 403 aaKnown RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 RPL14P50914 215 aaKnown RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 SLC37A1P57057 533 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 RPL38P63173 70 aaKnown RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 FUT7Q11130 342 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 PRR30Q53SZ7 412 aaPredicted RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 PIGGQ5H8A4 983 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 IL20RBQ6UXL0 311 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 DGAT2L6Q6ZPD8 337 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 Q6ZSR9 355 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 GALNTL5Q7Z4T8 443 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 ZNF321PQ8N8H1 164 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 OR6Y1Q8NGX8 325 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 TP53INP1Q96A56 240 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 ERP27Q96DN0 273 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 CNRIP1Q96F85 164 aaPredicted RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 RASL10BQ96S79 203 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 ACBD3Q9H3P7 528 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 LIN28AQ9H9Z2 209 aaKnown RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 HEY2Q9UBP5 337 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
CHD1-202ENST00000414220 EIF3LQ9Y262 564 aaKnown RBP13.64□□□□□ -0.23
CHD1-202ENST00000414220 PYCARD-AS1I3L0S3 204 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 PRKNO60260 465 aaPredicted RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 NME2P1O60361 137 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 BGNP21810 368 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 NME2P22392 152 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 RPP38P78345 283 aaKnown RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 ALDH6A1Q02252 535 aaKnown RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 RBPJQ06330 500 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 KIAA0040Q15053 153 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 PRICKLE4Q2TBC4 344 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 UGT3A2Q3SY77 523 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 FAM219BQ5XKK7 198 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 FAM71E1Q6IPT2 247 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 RTL4Q6ZR62 310 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 R3HCC1LQ7Z5L2 792 aaKnown RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 TICAM1Q8IUC6 712 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 C9orf40Q8IXQ3 194 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 CCDC116Q8IYX3 515 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 TLCD1Q96CP7 247 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 BARD1Q99728 777 aaKnown RBP13.63□□□□□ -0.23
CHD1-202ENST00000414220 VIPAS39Q9H9C1 493 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 TAS2R7Q9NYW3 318 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 CCL27Q9Y4X3 112 aa13.63□□□□□ -0.23
CHD1-202ENST00000414220 SMG1Q96Q15 3661 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 ANKUB1A6NFN9 424 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 TMEM200CA6NKL6 621 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 TMEM233B4DJY2 109 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 TCP11X1B4DZS4 312 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 HRKO00198 91 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 TP53I11O14683 189 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 LSM1O15116 133 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 PEX11AO75192 247 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms