RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NPEPPSL1A6NEC2 478 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OR2W5A6NFC9 320 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SH2D7A6NKC9 451 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 A8MUA0 341 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ANKRD66B4E2M5 251 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TEX22C9J3V5 150 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 C9JVG2 144 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NPIPA7E9PJI5 369 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 H3BMM5 538 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TFECO14948 347 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CHP2O43745 196 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PRKYO43930 277 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FADS1O60427 444 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ANP32DO95626 131 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MPIG6BO95866 241 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ABHD16AO95870 558 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TRUB2O95900 331 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 C4BPAP04003 597 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ICAM1P05362 532 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CHRNGP07510 517 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 HOXC6P09630 235 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 EBLN1P0CF75 366 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NPIPA8P0DM63 369 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CDH1P12830 882 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 COX4I1P13073 169 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF18P17022 549 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 IGFBP2P18065 325 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 GNAZP19086 355 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DDX6P26196 483 aaKnown RBP eCLIP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MST1P26927 711 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DCKP27707 260 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 C21orf33P30042 268 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PRDX5P30044 214 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SLC6A4P31645 630 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 STX2P32856 288 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SHMT2P34897 504 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ADRA1AP35348 466 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CYLC1P35663 651 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 AHRP35869 848 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CPOXP36551 454 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MAGEA3P43357 314 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NSFP46459 744 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 EIF2B2P49770 351 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CAMPP49913 170 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PRKXP51817 358 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ATP5J2P56134 94 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PTENP60484 403 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PITPNAQ00169 270 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CNTN2Q02246 1040 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF45Q02386 682 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ABHD18Q0P651 414 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PPP1R8Q12972 351 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PDIA2Q13087 525 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SLC39A6Q13433 755 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TUSC3Q13454 348 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SERTAD2Q14140 314 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TFDP1Q14186 410 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FHL2Q14192 279 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DPYSL3Q14195 570 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 HNF4GQ14541 408 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ICAM4Q14773 271 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 IRF4Q15306 451 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CHI3L2Q15782 390 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DPCR1Q3MIW9 517 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PAN3Q58A45 887 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 RUNDC3AQ59EK9 446 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CTSL3PQ5NE16 218 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF618Q5T7W0 954 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ARHGAP40Q5TG30 622 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TTC23Q5W5X9 447 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 C11orf63Q6NUN7 778 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NIPAL1Q6NVV3 410 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ASCL4Q6XD76 172 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM182Q6ZP80 229 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ESPNLQ6ZVH7 1005 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DPPA4Q7L190 304 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 GDPD3Q7L5L3 318 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NET1Q7Z628 596 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SCD5Q86SK9 330 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC71Q8IV32 467 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 LYSMD2Q8IV50 215 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 GPALPP1Q8IXQ4 340 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FAM109AQ8N4B1 249 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FBXO39Q8N4B4 442 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SLC44A3Q8N4M1 653 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TEX26Q8N6G2 289 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NOA1Q8NC60 698 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MCUQ8NE86 351 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 STXBP6Q8NFX7 210 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OR4D6Q8NGJ1 314 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OR2I1PQ8NGU4 316 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OR56A3Q8NH54 315 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PHOSPHO1Q8TCT1 267 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SPPL2AQ8TCT8 520 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CXorf40AQ8TE69 158 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SH3RF2Q8TEC5 729 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PYROXD1Q8WU10 500 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CHPT1Q8WUD6 406 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 RNF133Q8WVZ7 376 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms