RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CLEC3AO75596 197 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 IL18BPO95998 194 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 IGKV3-11P04433 115 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 GSTM2P28161 218 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 SSTR1P30872 391 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 OPRM1P35372 400 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 MTTPP55157 894 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 ID2Q02363 134 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 MGAT5Q09328 741 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 IFFO1Q0D2I5 559 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 RCN2Q14257 317 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 DCST1Q5T197 706 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 ADNP2Q6IQ32 1131 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 TRIM40Q6P9F5 258 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 ABHD17CQ6PCB6 329 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 PRSS57Q6UWY2 283 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 TMIGD1Q6UXZ0 262 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 SLCO4C1Q6ZQN7 724 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 MTERF4Q7Z6M4 381 aaKnown RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 YTHDF3Q7Z739 585 aaKnown RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 PM20D2Q8IYS1 436 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 DND1Q8IYX4 353 aaKnown RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 C9orf106Q8NAJ2 232 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 ANKRD9Q96BM1 317 aaPredicted RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 NTNG2Q96CW9 530 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 ZNF597Q96LX8 424 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 JSRP1Q96MG2 331 aaPredicted RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 DOHHQ9BU89 302 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 REXO4Q9GZR2 422 aaKnown RBP8.75□□□□□ -1.01
RFFL-203ENST00000413582 UBQLN3Q9H347 655 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 MED4Q9NPJ6 270 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 CNIH4Q9P003 139 aa8.75□□□□□ -1.01
RFFL-203ENST00000413582 GOLGA6L10A6NI86 522 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 HRKO00198 91 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SIAH2O43255 324 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 CDH16O75309 829 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SASH3O75995 380 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 C1QAP02745 245 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 C1GALT1C1LP0DN25 315 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 GNAZP19086 355 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 TNNI3P19429 210 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 CNTFP26441 200 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 CDK9P50750 372 aaKnown RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 IGLV3-21P80748 117 aaPredicted RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 SF3B4Q15427 424 aaKnown RBP eCLIP8.74□□□□□ -1.01
RFFL-203ENST00000413582 NHSL2Q5HYW2 709 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 UBAP2Q5T6F2 1119 aaKnown RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 TEDDM1Q5T9Z0 273 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 LGSNQ5TDP6 509 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 VASNQ6EMK4 673 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 ZNF793Q6ZN11 406 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 GALNT7Q86SF2 657 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SLC15A4Q8N697 577 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 FBF1Q8TES7 1133 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 PIGTQ969N2 578 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 ISL2Q96A47 359 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 PERPQ96FX8 193 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 PGM2Q96G03 612 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SENP5Q96HI0 755 aaPredicted RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 TRIB1Q96RU8 372 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 RBM24Q9BX46 236 aaKnown RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 STMN4Q9H169 189 aaPredicted RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 COPS7BQ9H9Q2 264 aaPredicted RBP8.74□□□□□ -1.01
RFFL-203ENST00000413582 LYRM4Q9HD34 91 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SMYD2Q9NRG4 433 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 CAMK2AQ9UQM7 478 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 SLC6A5Q9Y345 797 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 IKBKGQ9Y6K9 419 aa8.74□□□□□ -1.01
RFFL-203ENST00000413582 ANK3Q12955 4377 aaKnown RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 EXOC1LA0A1B0GW35 172 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 NPEPPSL1A6NEC2 478 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 FGF17O60258 216 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 ERN1O75460 977 aaKnown RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 CRLF1O75462 422 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 WDR47O94967 919 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 AHSGP02765 367 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 SHBGP04278 402 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 HPNP05981 417 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 MYZAPP0CAP1 466 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 TMIGD3P0DMS9 266 aaPredicted RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 COX7A2P14406 83 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 ZNF37AP17032 561 aaPredicted RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 BMP7P18075 431 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 HPDP32754 393 aaPredicted RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 SOX18P35713 384 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 MSH2P43246 934 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 STT3AP46977 705 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 CPA2P48052 419 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 SLC6A12P48065 614 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 SERPINB9P50453 376 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 CDKL1Q00532 357 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 ZNF844Q08AG5 666 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 FOXF2Q12947 444 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 NTRK2Q16620 822 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 C18orf21Q32NC0 220 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms