RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SPRED3Q2MJR0 410 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 PAOXQ6QHF9 649 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 ZNF551Q7Z340 670 aaPredicted RBP28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 MORN4Q8NDC4 146 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 SIMC1Q8NDZ2 872 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 OR9I1Q8NGQ6 314 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 M1APQ8TC57 530 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 ZNF721Q8TF20 911 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 AMDHD1Q96NU7 426 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 ELAC2Q9BQ52 826 aaKnown RBP28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 NUDT9Q9BW91 350 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 MAT2BQ9NZL9 334 aa28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 PPIEQ9UNP9 301 aaKnown RBP28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 COPG1Q9Y678 874 aaKnown RBP28.5■■■□□ 2.15
CSNK1E-206ENST00000413574 CACNA1GO43497 2377 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 ITGB2P05107 769 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 ICAM2P13598 275 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 NCF2P19878 526 aaPredicted RBP28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 ELP5Q8TE02 316 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 C10orf82Q8WW14 230 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 KAT2AQ92830 837 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 PRPF18Q99633 342 aaKnown RBP28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 CLMPQ9H6B4 373 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 ANKRA2Q9H9E1 313 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 MMP25Q9NPA2 562 aa28.49■■■□□ 2.15
CSNK1E-206ENST00000413574 SPANXN4Q5MJ08 99 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 OR4F3Q6IEY1 312 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 MIER2Q8N344 545 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 OR1N1Q8NGS0 311 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 BRIX1Q8TDN6 353 aaKnown RBP28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 FBXL20Q96IG2 436 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 DUSP26Q9BV47 211 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 ADAM21Q9UKJ8 722 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 BOD1L1Q8NFC6 3051 aa28.48■■■□□ 2.15
CSNK1E-206ENST00000413574 DYRK3O43781 588 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 SLC22A3O75751 556 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 GPX3P22352 226 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 SSTR4P31391 388 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 FRKP42685 505 aaPredicted RBP28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 PHC1P78364 1004 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 LINC00303Q3SY05 128 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 TRMT12Q53H54 448 aaKnown RBP28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 ZNF628Q5EBL2 1059 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 CPLX4Q7Z7G2 160 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 SIRT6Q8N6T7 355 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 FDCSPQ8NFU4 85 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 PSMF1Q92530 271 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 TESCQ96BS2 214 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 VMP1Q96GC9 406 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 ATAD3AQ9NVI7 634 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 NUP214P35658 2090 aaPredicted RBP28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 TRBV11-1A0A0K0K1C0 115 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 CLPSP04118 112 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 IGKV3-11P04433 115 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 PCSK2P16519 638 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 DGKQP52824 942 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 CLNS1AP54105 237 aaKnown RBP28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 POLE2P56282 527 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 HSPB3Q12988 150 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 FAM174BQ3ZCQ3 159 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 CAMKMTQ7Z624 323 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 BHLHE41Q9C0J9 482 aaPredicted RBP28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 LHPPQ9H008 270 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 ZIM2Q9NZV7 527 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 MAPRE3Q9UPY8 281 aa28.47■■■□□ 2.15
CSNK1E-206ENST00000413574 CACNA1BQ00975 2339 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 A8MUI8 341 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 PRKNO60260 465 aaPredicted RBP28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 S1PR1P21453 382 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 ZFP36L2P47974 494 aaKnown RBP28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 MANFP55145 182 aaKnown RBP28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 WNT3P56703 355 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 SOX8P57073 446 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 STX1BP61266 288 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 MAP4K2Q12851 820 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 EXOSC7Q15024 291 aaKnown RBP28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 SPATA21Q7Z572 469 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 VWA5B2Q8N398 1253 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 CTHRC1Q96CG8 243 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 SEMA4CQ9C0C4 833 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 GPR83Q9NYM4 423 aa28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 TNRC6AQ8NDV7 1962 aaKnown RBP28.46■■■□□ 2.15
CSNK1E-206ENST00000413574 CD1EP15812 388 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 CLCN2P51788 898 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 C6orf163Q5TEZ5 329 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 FCRLBQ6BAA4 426 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 TMEM107Q6UX40 140 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 THAP3Q8WTV1 239 aaPredicted RBP28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 TTC9Q92623 222 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 ZBED6CLQ96FA7 236 aaPredicted RBP28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 NSRP1Q9H0G5 558 aaKnown RBP28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 PTGFRNQ9P2B2 879 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 COPS7AQ9UBW8 275 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 TRIM33Q9UPN9 1127 aa28.45■■■□□ 2.14
CSNK1E-206ENST00000413574 A0A1W2PRB8 838 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 KIR3DL1P43629 444 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 SRSF11Q05519 484 aaKnown RBP28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 FUT7Q11130 342 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 B3GNTL1Q67FW5 361 aaPredicted RBP28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 OR7G2Q8NG99 324 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms