RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZNF749O43361 778 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 HPRP00739 348 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 SP1P08047 785 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 GSTA1P08263 222 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 CALCBP10092 127 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 TNNI3P19429 210 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 FCGR2BP31994 310 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 FCGR2CP31995 323 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZFP36L2P47974 494 aaKnown RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 IFNAR2P48551 515 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 NDST2P52849 883 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 MLF2Q15773 248 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 KNOP1Q1ED39 458 aaKnown RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 HKDC1Q2TB90 917 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 RIPPLY2Q5TAB7 128 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 MCM10Q7L590 875 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 KCNMB4Q86W47 210 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 GPBP1Q86WP2 473 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF573Q86YE8 665 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF248Q8NDW4 579 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 CHDHQ8NE62 594 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF397Q8NF99 534 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 WDR36Q8NI36 951 aaKnown RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 FBXO25Q8TCJ0 367 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 TRIM44Q96DX7 344 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 LITAFQ99732 161 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 RIBC2Q9H4K1 309 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 WDR41Q9HAD4 459 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 WWOXQ9NZC7 414 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 TMEM181Q9P2C4 612 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 EIF3KQ9UBQ5 218 aaKnown RBP4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 LAMP5Q9UJQ1 280 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 FKBP7Q9Y680 259 aa4.04□□□□□ -1.76
HMGB3P31-201ENST00000413333 AFF2P51816 1311 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 K7ERI5 159 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 NR5A2O00482 541 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 FBP2O00757 339 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 PDXKO00764 312 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 TSPAN2O60636 221 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF821O75541 412 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 IGLV1-44P01699 117 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 PCCBP05166 539 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 TSPAN8P19075 237 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 PRPHP41219 470 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 NDST1P52848 882 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 NUCB2P80303 420 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 NFATC2Q13469 925 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 USP43Q70EL4 1123 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 GOLGA7Q7Z5G4 137 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 CENPSQ8N2Z9 138 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 BANPQ8N9N5 519 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 GMCL1P1Q8NEA9 526 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 GIPC3Q8TF64 312 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 RAB7BQ96AH8 199 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 TEX13BQ9BXU2 312 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 IKZF3Q9UKT9 509 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 ZNF490Q9ULM2 529 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 FOXJ3Q9UPW0 622 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 NIP7Q9Y221 180 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 SLC9A8Q9Y2E8 581 aa4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 KLF2Q9Y5W3 355 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P31-201ENST00000413333 IGHV3-20A0A0C4DH32 117 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 H3BMH7 237 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 BUB1O43683 1085 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 NXPH4O95158 308 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 KRT6BP04259 564 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 ANXA4P09525 319 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZSCAN5DPP0CG00 497 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 EPB41P11171 864 aaKnown RBP4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 PTPN6P29350 595 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 ADRA1AP35348 466 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 DLSTP36957 453 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 PTGFRP43088 359 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 KRT6CP48668 564 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 SGSHP51688 502 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 CRYBA2P53672 197 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 NOP14P78316 857 aaKnown RBP4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 SRYQ05066 204 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRIP10Q15642 601 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 PARP6Q2NL67 630 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 C3P1Q6ZMU1 363 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 P4HA3Q7Z4N8 544 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 GPR142Q7Z601 462 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 CENPLQ8N0S6 344 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 GCNT2Q8N0V5 402 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 AQP11Q8NBQ7 271 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR4F5Q8NH21 305 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 HCAR2Q8TDS4 363 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 PNPLA2Q96AD5 504 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms