RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 GRTP1Q5TC63 336 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PRAMEF17Q5VTA0 474 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 IL23RQ5VWK5 629 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MBNL2Q5VZF2 373 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PTRHD1Q6GMV3 140 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 C8orf82Q6P1X6 216 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 LRRC8BQ6P9F7 803 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SPESP1Q6UW49 350 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 LARP4Q71RC2 724 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SYVN1Q86TM6 617 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 HPS6Q86YV9 775 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SLC22A15Q8IZD6 547 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 DSELQ8IZU8 1212 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TRIML2Q8N7C3 387 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PCYOX1LQ8NBM8 494 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 OR1L3Q8NH93 324 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 OR5K2Q8NHB8 316 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 LKAAEAR1Q8TD35 194 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 GIPC3Q8TF64 312 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ASZ1Q8WWH4 475 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ASB9Q96DX5 294 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PLEKHA8Q96JA3 519 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MAELQ96JY0 434 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PRPF18Q99633 342 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 EBF4Q9BQW3 602 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 GPR87Q9BY21 358 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SLC7A5P2Q9GIP4 190 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TWSG1Q9GZX9 223 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CHST8Q9H2A9 424 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ACTL8Q9H568 366 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 FAM60AQ9NP50 221 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ZNF71Q9NQZ8 489 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CHRAC1Q9NRG0 131 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SMYD2Q9NRG4 433 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 INIPQ9NRY2 104 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TREX1Q9NSU2 369 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 RIC8BQ9NVN3 520 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 DDX18Q9NVP1 670 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SPHK1Q9NYA1 384 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 OR6C2Q9NZP2 312 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MARCH4Q9P2E8 410 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 COPG2Q9UBF2 871 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CD300AQ9UGN4 299 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MID2Q9UJV3 735 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SERTAD3Q9UJW9 196 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PLAGL1Q9UM63 463 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 POLHQ9Y253 713 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 FARSAQ9Y285 508 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MAN2B2Q9Y2E5 1009 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 FAM32AQ9Y421 112 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CFAP46Q8IYW2 2715 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 A0A0G2JNJ9 132 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 A0A0J9YY10 115 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 MAGEB16A2A368 324 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ISM1B1AKI9 464 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 FAM47E-STBD1D6RA91 191 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 E7EQ34 232 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 MKRN2OSH3BPM6 223 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 FBP2O00757 339 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 KPNA5O15131 536 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 HDAC3O15379 428 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ZNF749O43361 778 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 AKAP10O43572 662 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ZBTB14O43829 449 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 GPC4O75487 556 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 TPPPO94811 219 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 SLCO2B1O94956 709 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 VAPBO95292 243 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ALDOAP04075 364 aaKnown RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 RPN2P04844 631 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 RAB40ALP0C0E4 278 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 RPS3P23396 243 aaKnown RBP eCLIP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 AOAHP28039 575 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 GABRB3P28472 473 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 PEBP1P30086 187 aaKnown RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 PKLRP30613 574 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 RORAP35398 523 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 MAN2A2P49641 1150 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 RPS18P62269 152 aaKnown RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 CDKL1Q00532 357 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 MS4A2Q01362 244 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 GALNT1Q10472 559 aaPredicted RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ILF2Q12905 390 aaKnown RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 STX5Q13190 355 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 CEACAM7Q14002 265 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 FLOT2Q14254 428 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 KIR2DS3Q14952 304 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 PCLAFQ15004 111 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 UGT8Q16880 541 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 SLC5A12Q1EHB4 618 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 DEFB110Q30KQ9 67 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 PTCHD3Q3KNS1 767 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 ZNF789Q5FWF6 425 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
LINC00342-201ENST00000412393 THOC7Q6I9Y2 204 aaKnown RBP5.01□□□□□ -1.61
LINC00342-201ENST00000412393 MRM1Q6IN84 353 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms