RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WDR53Q7Z5U6 358 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-204ENST00000409727 NAXDQ8IW45 347 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-204ENST00000409727 PQLC1Q8N2U9 271 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 C11orf65Q8NCR3 313 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 NUP43Q8NFH3 380 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 OR7G2Q8NG99 324 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 RNF145Q96MT1 663 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 SERHL2Q9H4I8 314 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 DDX18Q9NVP1 670 aaKnown RBP11.69□□□□□ -0.54
CHMP3-204ENST00000409727 OCIAD1Q9NX40 245 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
CHMP3-204ENST00000409727 H0YIG0 161 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 NTN3O00634 580 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 OR10H2O60403 315 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PRKD3O94806 890 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TIAF1O95411 115 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 HMGN2P05204 90 aaKnown RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 FHP07954 510 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 OR12D1P0DN82 309 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CD59P13987 128 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 MATN1P21941 496 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 ACP1P24666 158 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 EMP3P54852 163 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PRR5P85299 388 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 STX4Q12846 297 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 SCARB2Q14108 478 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TRIP10Q15642 601 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 AMIGO2Q86SJ2 522 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM126BQ8IUX1 230 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 SLITRK4Q8IW52 837 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 LILRA2Q8N149 483 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 XAGE5Q8WWM1 108 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 C16orf58Q96GQ5 468 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CTRCQ99895 268 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 EFHD1Q9BUP0 239 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 SPATA9Q9BWV2 254 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 C3orf14Q9HBI5 128 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 APMAPQ9HDC9 416 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM9BQ9NQ34 198 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 SEMA4GQ9NTN9 838 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CCM2LQ9NUG4 571 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 MRPS33Q9Y291 106 aaKnown RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 A0A1B0GX78 115 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 FAM149AA5PLN7 773 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 UPK1AO00322 258 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 HMGN4O00479 90 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CLDN4O14493 209 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 EMC8O43402 210 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 OPN1SWP03999 348 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 BCHEP06276 602 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 GPIP06744 558 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 MSL3P1P0C860 447 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 FBLP22087 321 aaKnown RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PEX2P28328 305 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PCGF2P35227 344 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 ARSFP54793 590 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 CDK6Q00534 326 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 MINDY4Q4G0A6 757 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TRMT12Q53H54 448 aaKnown RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 RPS26P11Q5JNZ5 115 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 ARHGAP40Q5TG30 622 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 BHLHB9Q6PI77 547 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM64Q6YI46 380 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PRSS58Q8IYP2 241 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 OR56A1Q8NGH5 318 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 ZNF304Q9HCX3 659 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 PRDM9Q9NQV7 894 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
CHMP3-204ENST00000409727 NCDNQ9UBB6 729 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 RARRES3Q9UL19 164 aa11.68□□□□□ -0.54
CHMP3-204ENST00000409727 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 C4orf47A7E2U8 309 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 DSCR3O14972 297 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 SCRG1O75711 98 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 ATP1B1P05026 303 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 PPP2R1BP30154 601 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 KDELR2P33947 212 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 NKG7Q16617 165 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 FAM98BQ52LJ0 330 aaKnown RBP11.67□□□□□ -0.54
CHMP3-204ENST00000409727 MTX3Q5HYI7 312 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 DGAT2L6Q6ZPD8 337 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 OLIG3Q7RTU3 272 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 SLC38A5Q8WUX1 472 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 CLIP3Q96DZ5 547 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 SLC47A1Q96FL8 570 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 DUS3LQ96G46 650 aaKnown RBP11.67□□□□□ -0.54
CHMP3-204ENST00000409727 TPD52L3Q96J77 140 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 LRFN3Q9BTN0 628 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 ALOXE3Q9BYJ1 711 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms