RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 FAM111BQ6SJ93 734 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 ICA1LQ8NDH6 482 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 RCBTB1Q8NDN9 531 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 OTUB1Q96FW1 271 aaPredicted RBP13.2□□□□□ -0.3
GPNMB-203ENST00000409458 ZNF184Q99676 751 aaPredicted RBP13.2□□□□□ -0.3
GPNMB-203ENST00000409458 RPS6KA6Q9UK32 745 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 ANGPT4Q9Y264 503 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 LRRC42Q9Y546 428 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 SPEGQ15772 3267 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 TTC28Q96AY4 2481 aa13.2□□□□□ -0.3
GPNMB-203ENST00000409458 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 IGHV5-10-1A0A0J9YXX1 117 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 H0YIG0 161 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 UPK1AO00322 258 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ZNF749O43361 778 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 CDC123O75794 336 aaPredicted RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 OPN1SWP03999 348 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 SEMG1P04279 462 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ATP1B1P05026 303 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 HMGN2P05204 90 aaKnown RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 BCHEP06276 602 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 OR12D1P0DN82 309 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 MATN1P21941 496 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ITGA1P56199 1179 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 PCBP3P57721 371 aaKnown RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 PRR5P85299 388 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 MAPK11Q15759 364 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 CYBRD1Q53TN4 286 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 BHLHB9Q6PI77 547 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 TTLL10Q6ZVT0 673 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ARHGAP22Q7Z5H3 698 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 VTCN1Q7Z7D3 282 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 EPHX4Q8IUS5 362 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ADAMTS18Q8TE60 1221 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 DOK4Q8TEW6 326 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 EME1Q96AY2 570 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 TAMM41Q96BW9 452 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 ZNF501Q96CX3 271 aaPredicted RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 TMEM19Q96HH6 336 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 CCDC74BQ96LY2 380 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 DHCR7Q9UBM7 475 aaKnown RBP13.19□□□□□ -0.3
GPNMB-203ENST00000409458 TRPC4Q9UBN4 977 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 AK5Q9Y6K8 562 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
GPNMB-203ENST00000409458 LNP1A1A4G5 178 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 SAC3D1A6NKF1 404 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 TMEM229AB2RXF0 380 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 TGFBR3LH3BV60 316 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 TFPTP0C1Z6 253 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 ERV3-1Q14264 604 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 MYBPC3Q14896 1274 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 TAF11Q15544 211 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 INTS11Q5TA45 600 aaKnown RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CCDC80Q76M96 950 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 SIMC1Q8NDZ2 872 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 SLC38A5Q8WUX1 472 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 POP5Q969H6 163 aaKnown RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CIB1Q99828 191 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 FANCEQ9HB96 536 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 C3orf14Q9HBI5 128 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 EQTNQ9NQ60 294 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 FGF21Q9NSA1 209 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 DDX18Q9NVP1 670 aaKnown RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 NTMQ9P121 344 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 RAB23Q9ULC3 237 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 AGRPO00253 132 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 PLOD2O00469 737 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CLOCKO15516 846 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 HYAL3O43820 417 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 LDLRP01130 860 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CKMT2P17540 419 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 NT5EP21589 574 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 MAGEA2P43356 314 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 OR1D4P47884 311 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-203ENST00000409458 FUT5Q11128 374 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 CRB2Q5IJ48 1285 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 FHL5Q5TD97 284 aa13.18□□□□□ -0.3
GPNMB-203ENST00000409458 REEP3Q6NUK4 255 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms