RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TUBA3EQ6PEY2 450 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 TICAM1Q8IUC6 712 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 DOK4Q8TEW6 326 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF75CPQ92670 426 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 EPN3Q9H201 632 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 PNPOQ9NVS9 261 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 LUZP4Q9P127 313 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 MYOTQ9UBF9 498 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 GIMAP2Q9UG22 337 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 EXO1Q9UQ84 846 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 CPAMD8Q8IZJ3 1885 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 TTLL8A6PVC2 850 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 ITGA10O75578 1167 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 NT5EP21589 574 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 TRHRP34981 398 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 CD96P40200 585 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 ASMTP46597 345 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 SLC37A1P57057 533 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 PPP2R2AP63151 447 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 OCRLQ01968 901 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 MAP4K2Q12851 820 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 CEBPEQ15744 281 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 C6orf163Q5TEZ5 329 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 FNDC5Q8NAU1 212 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 NUBPLQ8TB37 319 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 TRIM45Q9H8W5 580 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 BAIAP2L1Q9UHR4 511 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 ENTPD4Q9Y227 616 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 YARS2Q9Y2Z4 477 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 PCDHGA10Q9Y5H3 936 aa18.43■□□□□ 0.54
PDLIM2-207ENST00000409417 CT62P0C5K7 136 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 S1PR1P21453 382 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 DUSP2Q05923 314 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 MGAT2Q10469 447 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 PRICKLE4Q2TBC4 344 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 RNF111Q6ZNA4 994 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 C9orf40Q8IXQ3 194 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 CCDC116Q8IYX3 515 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 VWA5B2Q8N398 1253 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 OR7G1Q8NGA0 311 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF764Q96H86 408 aaPredicted RBP18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 TSSK3Q96PN8 268 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 ANKRD10Q9NXR5 420 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 MAT2BQ9NZL9 334 aa18.42■□□□□ 0.54
PDLIM2-207ENST00000409417 HELZ2Q9BYK8 2649 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 CROCCQ5TZA2 2017 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 OR6C76A6NM76 312 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 OR2J2O76002 312 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 CLPSP04118 112 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 SSTR4P31391 388 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 MPIP34949 423 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 CYB561P49447 251 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 HLCSP50747 726 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 OC90Q02509 493 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 TLE1Q04724 770 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 EMX2Q04743 252 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 MAD2L1Q13257 205 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 OR1C1Q15619 314 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 SMU1Q2TAY7 513 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF468Q5VIY5 522 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 HORMAD2Q8N7B1 307 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 ADCY4Q8NFM4 1077 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 SUN3Q8TAQ9 357 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF675Q8TD23 568 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 CTHRC1Q96CG8 243 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 PPP1R36Q96LQ0 422 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 NUF2Q9BZD4 464 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 AKTIPQ9H8T0 292 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 MEAF6Q9HAF1 191 aa18.41■□□□□ 0.54
PDLIM2-207ENST00000409417 MYO1GB0I1T2 1018 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 WWP2O00308 870 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 HDAC3O15379 428 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 PRAMEF2O60811 474 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 VPS4BO75351 444 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 PRPS2P11908 318 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 ST13P50502 369 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 SSR4P51571 173 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 MLLT10P55197 1068 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 PRSS53Q2L4Q9 553 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 MPEG1Q2M385 716 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 IL23RQ5VWK5 629 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 C16orf47Q6ZP98 133 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 SLC29A4Q7RTT9 530 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 TMEM156Q8N614 296 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF615Q8N8J6 731 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 MDS2Q8NDY4 140 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 CLHC1Q8NHS4 586 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 GFM2Q969S9 779 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 ERP27Q96DN0 273 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 BBS4Q96RK4 519 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 C1orf50Q9BV19 199 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 BRINP2Q9C0B6 783 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 REEP4Q9H6H4 257 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 LIN28AQ9H9Z2 209 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 INTS9Q9NV88 658 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 LRFN1Q9P244 771 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF639Q9UID6 485 aa18.4■□□□□ 0.54
PDLIM2-207ENST00000409417 SLCO1B7G3V0H7 640 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 AKAP10O43572 662 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms