RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HORMAD2Q8N7B1 307 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 BBS10Q8TAM1 723 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 LCN9Q8WX39 176 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 FCGR1BQ92637 280 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 C1GALT1C1Q96EU7 318 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 AIF1LQ9BQI0 150 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 PDPK1O15530 556 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 GASTP01350 101 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 NAT2P11245 290 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CERS1P27544 350 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SP140Q13342 867 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 HYAL4Q2M3T9 481 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 IQCCQ4KMZ1 466 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SPIN4Q56A73 249 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 LHFPL3Q86UP9 236 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL6A2-204ENST00000409416 METTL4Q8N3J2 472 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CXorf36Q9H7Y0 433 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
COL6A2-204ENST00000409416 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 QPCTLQ9NXS2 382 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 PCDHGA3Q9Y5H0 932 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 BTN3A3O00478 584 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CSF2P04141 144 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 FHP07954 510 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 P2RY2P41231 377 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 GPR19Q15760 415 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 C6orf120Q7Z4R8 191 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CXorf40BQ96DE9 158 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 CDADC1Q9BWV3 514 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 SPATA6Q9NWH7 488 aaPredicted RBP12.7□□□□□ -0.38
COL6A2-204ENST00000409416 ANKMY1Q9P2S6 941 aa12.7□□□□□ -0.38
COL6A2-204ENST00000409416 TRBV4-1A0A0J9YWV2 114 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 FAM183AA6NL82 134 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 DSCR3O14972 297 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GCM2O75603 506 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 KCNK2O95069 426 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 NFATC1O95644 943 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 ITGA2P17301 1181 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TUBA1BP68363 451 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TUBA1AQ71U36 451 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 LRRTM4Q86VH4 590 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 C10orf53Q8N6V4 93 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GATSQ8NAP1 163 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 POLR2J3Q9H1A7 115 aaKnown RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 KLHL1Q9NR64 748 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TAS2R9Q9NYW1 312 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 CLEC2DQ9UHP7 191 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 HCN4Q9Y3Q4 1203 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 A8MUA0 341 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TAF4O00268 1085 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 ENTPD6O75354 484 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 AP2A2O94973 939 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 FAM214AQ32MH5 1076 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 UBE2UQ5VVX9 321 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 LIPKQ5VXJ0 399 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 OTPQ5XKR4 325 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 NXPE4Q6UWF7 544 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 SLCO4C1Q6ZQN7 724 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GRHL3Q8TE85 626 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GPATCH2Q9NW75 528 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 ENTPD4Q9Y227 616 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 PCDHGB6Q9Y5F9 930 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 IFNA14P01570 189 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 MMP12P39900 470 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 PIK3CBP42338 1070 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 RUNX1T1Q06455 604 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 MSANTD1Q6ZTZ1 278 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 MINDY2Q8NBR6 621 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
COL6A2-204ENST00000409416 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 DTD2Q96FN9 168 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 GAL3ST1Q99999 423 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 CLDND1Q9NY35 253 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 AHSPQ9NZD4 102 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 NDOR1Q9UHB4 597 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 BTNL2Q9UIR0 455 aa12.69□□□□□ -0.38
COL6A2-204ENST00000409416 PGRMC2O15173 223 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms