RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FAM60AQ9NP50 221 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 PRAMEF25A6NGN4 478 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 C19orf67A6NJJ6 358 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 SLC9B1P1A6NJY1 282 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 SLC16A6O15403 523 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 GALR3O60755 368 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 MITFO75030 526 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 DNAJB6O75190 326 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 DNAJB5O75953 348 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 IFNW1P05000 195 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 ITGAMP11215 1152 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 CD247P20963 164 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 TUBA4AP68366 448 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 IL1RL1Q01638 556 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 SPIBQ01892 262 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 KCNC4Q03721 635 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 DEFB133Q30KQ1 61 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 WDR45BQ5MNZ6 344 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 GALNT5Q7Z7M9 940 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 C17orf82Q86X59 251 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 ATG16L2Q8NAA4 619 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 PROX1Q92786 737 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 TREX2Q9BQ50 279 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 YIPF4Q9BSR8 244 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 TUBA8Q9NY65 449 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 THEGQ9P2T0 379 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 NAALAD2Q9Y3Q0 740 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 LYVE1Q9Y5Y7 322 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 ENPP4Q9Y6X5 453 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 A0A087WXM4 84 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 SMIM31A0A1B0GVY4 71 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 PRAMEF27A3QJZ7 478 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 UGT2B11O75310 529 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 JRKO75564 520 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 FESP07332 822 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 XCR1P46094 333 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 YAP1P46937 504 aaKnown RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 PPM1FP49593 454 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 CRISP3P54108 245 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 IL18R1Q13478 541 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 LTB4RQ15722 352 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 FAHD1Q6P587 224 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 USP53Q70EK8 1073 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 PRSS41Q7RTY9 318 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 KRT73Q86Y46 540 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 BBS10Q8TAM1 723 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 KAT2AQ92830 837 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 COL21A1Q96P44 957 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 PIP5K1AQ99755 562 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 DUSP15Q9H1R2 295 aaPredicted RBP17.84■□□□□ 0.45
USP39-202ENST00000409025 KRT84Q9NSB2 600 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 STARD5Q9NSY2 213 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 SEC14L3Q9UDX4 400 aa17.84■□□□□ 0.45
USP39-202ENST00000409025 GON4LQ3T8J9 2241 aa17.83■□□□□ 0.45
USP39-202ENST00000409025 SDC3O75056 442 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 RHCEP18577 417 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 DEFB110Q30KQ9 67 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 OGFOD3Q6PK18 319 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 MCATQ8IVS2 390 aaKnown RBP17.83■□□□□ 0.44
USP39-202ENST00000409025 GIPC3Q8TF64 312 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 COL26A1Q96A83 441 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 C16orf58Q96GQ5 468 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 IER2Q9BTL4 223 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 NPLQ9BXD5 320 aaPredicted RBP17.83■□□□□ 0.44
USP39-202ENST00000409025 EPB41L1Q9H4G0 881 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 RIBC2Q9H4K1 309 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 TMEM74BQ9NUR3 256 aa17.83■□□□□ 0.44
USP39-202ENST00000409025 GPC6Q9Y625 555 aaPredicted RBP17.83■□□□□ 0.44
USP39-202ENST00000409025 TRIM64A6NGJ6 449 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 BCAT2O15382 392 aaPredicted RBP17.82■□□□□ 0.44
USP39-202ENST00000409025 HCRTR1O43613 425 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 AFF3P51826 1226 aaKnown RBP17.82■□□□□ 0.44
USP39-202ENST00000409025 CDH12P55289 794 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 CDH15P55291 814 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 NADK2Q4G0N4 442 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 OR4N5Q8IXE1 308 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 ABCA7Q8IZY2 2146 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 LGI4Q8N135 537 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 CA13Q8N1Q1 262 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 OTUB1Q96FW1 271 aaPredicted RBP17.82■□□□□ 0.44
USP39-202ENST00000409025 TCTN2Q96GX1 697 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 MAP3K3Q99759 626 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 SPATA5L1Q9BVQ7 753 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 ANKHQ9HCJ1 492 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 BCL2L10Q9HD36 194 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 TMEM131Q92545 1883 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 EML5Q05BV3 1969 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 BCKDKO14874 412 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 ASNA1O43681 348 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 SRPX2O60687 465 aaPredicted RBP17.82■□□□□ 0.44
USP39-202ENST00000409025 PIAS2O75928 621 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 CPMP14384 443 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 PORP16435 677 aaPredicted RBP17.82■□□□□ 0.44
USP39-202ENST00000409025 KCNJ5P48544 419 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 RPS6KA3P51812 740 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 C14orf28Q4W4Y0 310 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 ZNF691Q5VV52 312 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 FAM92BQ6ZTR7 304 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 DNAJC22Q8N4W6 341 aa17.82■□□□□ 0.44
USP39-202ENST00000409025 GPR32P1Q8NGA4 272 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms