RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF791Q3KP31 576 aaPredicted RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SGO1Q5FBB7 561 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ACSM2BQ68CK6 577 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC48A1Q6P1K1 146 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 DOLPP1Q86YN1 238 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 LIX1Q8N485 282 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF321PQ8N8H1 164 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 PPWD1Q96BP3 646 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ERP27Q96DN0 273 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF597Q96LX8 424 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 NSUN5Q96P11 429 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SMC6Q96SB8 1091 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 RHOXF2Q9BQY4 288 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 MRPL1Q9BYD6 325 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 LDAHQ9H6V9 325 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 EXO5Q9H790 373 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 LIN28AQ9H9Z2 209 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 CXorf21Q9HAI6 301 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ZBTB26Q9HCK0 441 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 MCM8Q9UJA3 840 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 PCDHA9Q9Y5H5 950 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ANKRD33BA6NCL7 494 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 GLOD5A6NK44 160 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 FOXO6A8MYZ6 492 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 MANBAO00462 879 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 AQP7O14520 342 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 WDR1O75083 606 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CRCPO75575 148 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 BCAS2O75934 225 aaPredicted RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 OR4F21O95013 312 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 SNX4O95219 450 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PDYNP01213 254 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ATP1B1P05026 303 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CCL3P10147 92 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 MYL2P10916 166 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DRD2P14416 443 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 GABRA1P14867 456 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 NAGAP17050 411 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 SSTR2P30874 369 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CHRNB4P30926 498 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 HSD17B3P37058 310 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 MAN2A2P49641 1150 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PRKAA2P54646 552 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CDH13P55290 713 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DCAF7P61962 342 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ADORA2A-AS1P86434 159 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 FUT7Q11130 342 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC29A2Q14542 456 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC10A1Q14973 349 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 HEPACAMQ14CZ8 416 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 NTRK2Q16620 822 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF750Q32MQ0 723 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CCDC153Q494R4 210 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF678Q5SXM1 525 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 WLSQ5T9L3 541 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 TMEM198Q66K66 360 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 LETMD1Q6P1Q0 360 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 C16orf47Q6ZP98 133 aaPredicted RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 LRRC25Q8N386 305 aaPredicted RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 TMEM251Q8N6I4 163 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 OR52N2Q8NGI0 321 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 OR5M3Q8NGP4 307 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 RDH11Q8TC12 318 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 METTL6Q8TCB7 284 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 RND1Q92730 232 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 SDCCAG3Q96C92 435 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 KLHL29Q96CT2 875 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 L3HYPDHQ96EM0 354 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PHF12Q96QT6 1004 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DMRTA2Q96SC8 542 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DOHHQ9BU89 302 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DEFB127Q9H1M4 99 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 OR10A5Q9H207 317 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ZFP64Q9NPA5 681 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PFDN4Q9NQP4 134 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 DEPPQ9NTK1 212 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 TEX10Q9NXF1 929 aaPredicted RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PRODH2Q9UF12 536 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 WBP11Q9Y2W2 641 aaKnown RBP8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 PCDHGB3Q9Y5G1 929 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 GTF3C1Q12789 2109 aa8.38□□□□□ -1.07
SNORD88A-201ENST00000408314 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 CREBBPQ92793 2442 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 TRGV5A0A0B4J1U4 118 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 A0A1B0GVC2 190 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 GNG14A0A1W2PPG7 69 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 NPIPA2E9PIF3 369 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 NPIPA3F8WFD2 350 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 ACOX3O15254 700 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 PCDH7O60245 1069 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 DLX3O60479 287 aa8.37□□□□□ -1.07
SNORD88A-201ENST00000408314 PRKRAO75569 313 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms