RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TANKQ92844 425 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TESCQ96BS2 214 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 DTNBP1Q96EV8 351 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 MAPKAP1Q9BPZ7 522 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TNFRSF12AQ9NP84 129 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 CCM2LQ9NUG4 571 aaPredicted RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 ICKQ9UPZ9 632 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ERVK-19Q9WJR5 959 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 AP1M2Q9Y6Q5 423 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 C17orf105B2RV13 164 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TARM1B6A8C7 271 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ADAM23O75077 832 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 MFN2O95140 757 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 CPNE6O95741 557 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TNFRSF1BP20333 461 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ARRB2P32121 409 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 RORAP35398 523 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TIMM50Q3ZCQ8 353 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ZZZ3Q8IYH5 903 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 PELI3Q8N2H9 469 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 G6PC3Q9BUM1 346 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 SEMA6CQ9H3T2 930 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 SERINC1Q9NRX5 453 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 IKZF2Q9UKS7 526 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 IFT52Q9Y366 437 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 A0A1B0GTL3 188 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 HCN1O60741 890 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 PRKRAO75569 313 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 CH25HO95992 272 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 APOA1P02647 267 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 C1QAP02745 245 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 HSD11B2P80365 405 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 SLC5A12Q1EHB4 618 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 LEXMQ3ZCV2 418 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ADNP2Q6IQ32 1131 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ENPP6Q6UWR7 440 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 RNFT2Q96EX2 444 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 CNDP2Q96KP4 475 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 ACTRT3Q9BYD9 372 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 EPB41L1Q9H4G0 881 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 TMEM45AQ9NWC5 275 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 KCMF1Q9P0J7 381 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ZNF229Q9UJW7 825 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ATXN7L1Q9ULK2 861 aaPredicted RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 GPR179Q6PRD1 2367 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 LRRC37A2A6NM11 1700 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 RGS10O43665 173 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 GPR75O95800 540 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 LYNP07948 512 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 GGT1P19440 569 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 FCARP24071 287 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 KIAA1614Q5VZ46 1190 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 C18orf63Q68DL7 685 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 LCN8Q6JVE9 175 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 DNAJA3Q96EY1 480 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 MS4A4EQ96PG1 132 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 UNC13CQ8NB66 2214 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 IGHV1OR15-9A0A0B4J2B8 117 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 YKT6O15498 198 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 PRAMEF2O60811 474 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 GP1BBP13224 206 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 IFI30P13284 250 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 TTKP33981 857 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 TRA2BP62995 288 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 PLGLB1Q02325 96 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 BNIP3Q12983 259 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 EXOSC7Q15024 291 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 TRAM2Q15035 370 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 RUNDC3AQ59EK9 446 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 SLC30A6Q6NXT4 461 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ABHD17CQ6PCB6 329 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 CDRT4Q8N9R6 151 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 ZNF548Q8NEK5 533 aaPredicted RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 MAELQ96JY0 434 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 ZNF354BQ96LW1 612 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 SGPP1Q9BX95 441 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 CD93Q9NPY3 652 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 SLC39A1Q9NY26 324 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 NLGN3Q9NZ94 848 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 PTGFRNQ9P2B2 879 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 POFUT2Q9Y2G5 429 aa8.6□□□□□ -1.03
LIG4-202ENST00000405925 PTRH2Q9Y3E5 179 aaKnown RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 NUP214P35658 2090 aaPredicted RBP8.6□□□□□ -1.03
LIG4-202ENST00000405925 A0A1W2PPC1 479 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 FBP2O00757 339 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 PLPP1O14494 284 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 SCRG1O75711 98 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 CLIC3O95833 236 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ST6GAL1P15907 406 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms