RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SLC22A2O15244 555 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 GALNSP34059 522 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 MRPS35P82673 323 aaKnown RBP31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 FAM111BQ6SJ93 734 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 TREML1Q86YW5 311 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 GALNT12Q8IXK2 581 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 KAT2AQ92830 837 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 MAT2BQ9NZL9 334 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 FBXL4Q9UKA2 621 aa31.07■■■□□ 2.56
CSNK1E-204ENST00000403904 HRKO00198 91 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 CFLARO15519 480 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 SNRPB2P08579 225 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 TLE3Q04726 772 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 MGAT2Q10469 447 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 ZNF267Q14586 743 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 MLC1Q15049 377 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 LRRC69Q6ZNQ3 347 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 NDUFAF7Q7L592 441 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 OR5P2Q8WZ92 322 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 DAZLQ92904 295 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 ERP27Q96DN0 273 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 ERVK-11Q9UQG0 969 aa31.06■■■□□ 2.56
CSNK1E-204ENST00000403904 LOC100653049A0A140TA62 436 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 A0A1W2PQ72 361 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ASPDHA6ND91 283 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 SAGE2PA6NJ88 616 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 MASP2O00187 686 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 PEX12O00623 359 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 KRT34O76011 436 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ABCB1P08183 1280 aaPredicted RBP31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 GPC1P35052 558 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 SOX18P35713 384 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 HBA1P69905 142 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ZNF628Q5EBL2 1059 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 FITM2Q8N6M3 262 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 OR14A16Q8NHC5 309 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 IP6K3Q96PC2 410 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 CNPPD1Q9BV87 410 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ANKRD11Q6UB99 2663 aaPredicted RBP31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 NSG1A0A0A6YYJ2 146 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 CPSF4O95639 269 aaKnown RBP31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ITPKBP27987 946 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 CDK9P50750 372 aaKnown RBP31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 TERF2Q15554 542 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 MAPKAPK3Q16644 382 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 SPRED3Q2MJR0 410 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 SLC2A7Q6PXP3 512 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 TMEM107Q6UX40 140 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 CCDC81Q6ZN84 652 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 VPS50Q96JG6 964 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 OR8D2Q9GZM6 311 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ANKRA2Q9H9E1 313 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 ZNF160Q9HCG1 818 aa31.05■■■□□ 2.56
CSNK1E-204ENST00000403904 A0A1W2PP18 115 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 DYRK3O43781 588 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 MAP4K2Q12851 820 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 TLR1Q15399 786 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 TRMT12Q53H54 448 aaKnown RBP31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 C6orf163Q5TEZ5 329 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 SNX32Q86XE0 403 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 VWA5B2Q8N398 1253 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 NFAM1Q8NET5 270 aaPredicted RBP31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 OR4A15Q8NGL6 344 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 ZNF675Q8TD23 568 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 SENP5Q96HI0 755 aaPredicted RBP31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 IMMP1LQ96LU5 166 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 CCDC115Q96NT0 180 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 INPP5KQ9BT40 448 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 TUBB6Q9BUF5 446 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 BTNL2Q9UIR0 455 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 PCDHGB4Q9UN71 923 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 ERVK-19Q9WJR5 959 aa31.04■■■□□ 2.56
CSNK1E-204ENST00000403904 DYTNA2CJ06 578 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 CAPN14A8MX76 684 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 DDAH2O95865 285 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 MC3RP41968 323 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 CDC20Q12834 499 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 CRTC2Q53ET0 693 aaPredicted RBP31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 BROXQ5VW32 411 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 MSANTD1Q6ZTZ1 278 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 POU5F2Q8N7G0 328 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 ZNF321PQ8N8H1 164 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 ZSCAN1Q8NBB4 408 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 SIMC1Q8NDZ2 872 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 OR7G2Q8NG99 324 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 SLC2A12Q8TD20 617 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 TSPEARQ8WU66 669 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 CTHRC1Q96CG8 243 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 ELP4Q96EB1 424 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 SLC25A23Q9BV35 468 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 RMND5AQ9H871 391 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 SERHLQ9NQF3 203 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 TAS2R9Q9NYW1 312 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 NDUFAF1Q9Y375 327 aa31.03■■■□□ 2.56
CSNK1E-204ENST00000403904 TMEM8BA6NDV4 472 aa31.02■■■□□ 2.56
CSNK1E-204ENST00000403904 SLC26A5P58743 744 aa31.02■■■□□ 2.56
CSNK1E-204ENST00000403904 MAPRE2Q15555 327 aa31.02■■■□□ 2.56
CSNK1E-204ENST00000403904 MORN4Q8NDC4 146 aa31.02■■■□□ 2.56
CSNK1E-204ENST00000403904 B3GNT7Q8NFL0 401 aa31.02■■■□□ 2.56
CSNK1E-204ENST00000403904 FBXL20Q96IG2 436 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms