RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PIWIL3Q7Z3Z3 882 aaKnown RBP24.07■■□□□ 1.44
CPNE1-205ENST00000401607 PATL1Q86TB9 770 aaKnown RBP24.07■■□□□ 1.44
CPNE1-205ENST00000401607 SLC44A2Q8IWA5 706 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-205ENST00000401607 TANKQ92844 425 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 GIMAP5Q96F15 307 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 OTUB1Q96FW1 271 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-205ENST00000401607 C16orf58Q96GQ5 468 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 YIPF4Q9BSR8 244 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 OSBPL11Q9BXB4 747 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 Q9H521 79 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 THUMPD1Q9NXG2 353 aaKnown RBP24.07■■□□□ 1.44
CPNE1-205ENST00000401607 NTMQ9P121 344 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 CLCA2Q9UQC9 943 aa24.07■■□□□ 1.44
CPNE1-205ENST00000401607 ADAMTS9Q9P2N4 1935 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 C5orf58C9J3I9 102 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 H3BMH7 237 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 NSA2O95478 260 aaKnown RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 GPR75O95800 540 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 CNR2P34972 360 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 HOXD12P35452 270 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 HSD11B2P80365 405 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 NHSL2Q5HYW2 709 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 FAM111BQ6SJ93 734 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 TMEM179BQ7Z7N9 219 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 MARVELD2Q8N4S9 558 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 NR1H4Q96RI1 486 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 IRAK4Q9NWZ3 460 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 HCN3Q9P1Z3 774 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 P2RX2Q9UBL9 471 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 RAB23Q9ULC3 237 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 MUC3AQ02505 3323 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 PLOD2O00469 737 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 SIGLEC6O43699 453 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 PGM3O95394 542 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 PPP1R8Q12972 351 aaKnown RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 NR0B2Q15466 257 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 SYPL1Q16563 259 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 SNAP47Q5SQN1 464 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 GUSBP11Q6P575 273 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 WDR74Q6RFH5 385 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 PRSS42Q7Z5A4 293 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 TSEN54Q7Z6J9 526 aaKnown RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 OR2I1PQ8NGU4 316 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 XAGE5Q8WWM1 108 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 GATA6Q92908 595 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 ANKRD9Q96BM1 317 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-205ENST00000401607 NUDT22Q9BRQ3 303 aa24.06■■□□□ 1.44
CPNE1-205ENST00000401607 MYOCOSA0A1B0GUC4 107 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 YKT6O15498 198 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 DIRAS1O95057 198 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 IFNA14P01570 189 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 PNLIPP16233 465 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 SKP1P63208 163 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 FUT5Q11128 374 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 ZNF628Q5EBL2 1059 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 OTUD3Q5T2D3 398 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-205ENST00000401607 OR2T5Q6IEZ7 315 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 HS3ST5Q8IZT8 346 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 SVOPLQ8N434 492 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 D2HGDHQ8N465 521 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 OR2T29Q8NH02 315 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 MAGEE2Q8TD90 523 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-205ENST00000401607 N4BP2L2Q92802 583 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-205ENST00000401607 ENAMQ9NRM1 1142 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 PADI2Q9Y2J8 665 aa24.05■■□□□ 1.44
CPNE1-205ENST00000401607 G3V2T6 193 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 SLC28A2O43868 658 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 ATP1B1P05026 303 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 TNFRSF1BP20333 461 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 DCTP40126 519 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 MAN2A2P49641 1150 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 ARSFP54793 590 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 MAT1AQ00266 395 aaKnown RBP24.04■■□□□ 1.44
CPNE1-205ENST00000401607 PDK3Q15120 406 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 IFI44LQ53G44 452 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 PERM1Q5SV97 790 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 NIPAL1Q6NVV3 410 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 STK32CQ86UX6 486 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 ZDHHC13Q8IUH4 622 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 LGI4Q8N135 537 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 OR2L13Q8N349 312 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 METTL25Q8N6Q8 603 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 SMYD1Q8NB12 490 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 OR5K1Q8NHB7 308 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 SLC41A2Q96JW4 573 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 RBCK1Q9BYM8 510 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 DDX18Q9NVP1 670 aaKnown RBP24.04■■□□□ 1.44
CPNE1-205ENST00000401607 CABIN1Q9Y6J0 2220 aa24.04■■□□□ 1.44
CPNE1-205ENST00000401607 PRAMEF25A6NGN4 478 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 EIF4E1BA6NMX2 242 aaKnown RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 RNH1P13489 461 aaKnown RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 ANXA11P50995 505 aaKnown RBP24.03■■□□□ 1.44
CPNE1-205ENST00000401607 ITGA1P56199 1179 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 DAG1Q14118 895 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 GRM7Q14831 915 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 FAM181AQ8N9Y4 354 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 ZBTB44Q8NCP5 570 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 SIMC1Q8NDZ2 872 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 OR6C4Q8NGE1 309 aa24.03■■□□□ 1.44
CPNE1-205ENST00000401607 CEP76Q8TAP6 659 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms