RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 ZNF630Q2M218 657 aaPredicted RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 BTBD16Q32M84 506 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 ZNF750Q32MQ0 723 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 RNF180Q86T96 592 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 RDH10Q8IZV5 341 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 GOT1L1Q8NHS2 421 aaPredicted RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 RETREG1Q9H6L5 497 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 ANTXRLA6NF34 631 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 C12orf71A8MTZ7 269 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 SCO1O75880 301 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 MANFP55145 182 aaKnown RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 OR4F15Q8NGB8 312 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 OR5H6Q8NGV6 325 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 IGSF21Q96ID5 467 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 WACQ9BTA9 647 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 CD8B2A6NJW9 211 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 UGDHO60701 494 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 C1orf105O95561 183 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 H1F0P07305 194 aaKnown RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 SYPP08247 313 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 CD8BP10966 210 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 PSMB5P28074 263 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 RNF144AP50876 292 aaPredicted RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 ELAVL2Q12926 359 aaKnown RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 ILKQ13418 452 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 GDPD4Q6W3E5 623 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 TIGD4Q8IY51 512 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 GHDCQ8N2G8 530 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 Q8N402 240 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 FIBINQ8TAL6 211 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 OVCA2Q8WZ82 227 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 ZNF582Q96NG8 517 aaPredicted RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 SPATA9Q9BWV2 254 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 CNIH4Q9P003 139 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 KCND3Q9UK17 655 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 NTNG1Q9Y2I2 539 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 CENPBD1B2RD01 187 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 SLC16A5O15375 505 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 ASAH1Q13510 395 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 SNAPC1Q16533 368 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 TRMT11Q7Z4G4 463 aaKnown RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 SETD6Q8TBK2 473 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 DEDD2Q8WXF8 326 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 ZDHHC4Q9NPG8 344 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 HCN2Q9UL51 889 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 HSPB11Q9Y547 144 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 HYAL3O43820 417 aaPredicted RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 ITGB7P26010 798 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 AGFG1P52594 562 aaKnown RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 CHRNEQ04844 493 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 FAPQ12884 760 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 IL18Q14116 193 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 GPR19Q15760 415 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 C12orf73Q69YU5 71 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 ASB18Q6ZVZ8 466 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 KIF18BQ86Y91 864 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 TRAPPC5Q8IUR0 188 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 SLC38A6Q8IZM9 456 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.86■□□□□ 0.77
CTCF-202ENST00000401394 ZG16BQ96DA0 208 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 OR2AG1Q9H205 316 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 HCFC1R1Q9NWW0 138 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 INSL5Q9Y5Q6 135 aa19.86■□□□□ 0.77
CTCF-202ENST00000401394 HMGN4O00479 90 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 LANCL1O43813 399 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 ZNF780AO75290 641 aaPredicted RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 SLC2A2P11168 524 aaPredicted RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 SELPP16109 830 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 POU3F3P20264 500 aaPredicted RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 ALAS2P22557 587 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 TAP2Q03519 686 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 QPRTQ15274 297 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 ZNF791Q3KP31 576 aaPredicted RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 RNASE12Q5GAN4 147 aaKnown RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 OTULINQ96BN8 352 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 NLNQ9BYT8 704 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 FBXW2Q9UKT8 454 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 RPL36Q9Y3U8 105 aaKnown RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 HCFC2Q9Y5Z7 792 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 SLC5A10A0PJK1 596 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 ZSCAN5BA6NJL1 495 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 CASKO14936 926 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 SLC28A2O43868 658 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 GNG2P59768 71 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 PDE7AQ13946 482 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 NCF4Q15080 339 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 LAMTOR1Q6IAA8 161 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 PLET1Q6UQ28 207 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 C6orf120Q7Z4R8 191 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 RASGRP3Q8IV61 690 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 PROKR2Q8NFJ6 384 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 OR6T1Q8NGN1 323 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 ARMC5Q96C12 935 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 TEX10Q9NXF1 929 aaPredicted RBP19.85■□□□□ 0.77
CTCF-202ENST00000401394 SEC14L3Q9UDX4 400 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 MOSPD1Q9UJG1 213 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 A4GNTQ9UNA3 340 aa19.85■□□□□ 0.77
CTCF-202ENST00000401394 IQCMA0A1B0GVH7 501 aa19.84■□□□□ 0.77
CTCF-202ENST00000401394 PLPP1O14494 284 aa19.84■□□□□ 0.77
CTCF-202ENST00000401394 ICMTO60725 284 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms