RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 FRMD1Q8N878 549 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 OR52E4Q8NGH9 312 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 HMGCLL1Q8TB92 370 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 LINC00615Q96LM1 132 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 CHURC1-FNTBB4DL54 471 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 M0R3H8 397 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 MFN2O95140 757 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 CEACAM5P06731 702 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 GSTM2P28161 218 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 RAPSNQ13702 412 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 C6orf132Q5T0Z8 1188 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 TTLL10Q6ZVT0 673 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 CLIP4Q8N3C7 705 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 RFKQ969G6 155 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 C12orf43Q96C57 262 aaKnown RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 TSSK6Q9BXA6 273 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 POLR2J2Q9GZM3 115 aaKnown RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 MAN2B2Q9Y2E5 1009 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 A0A0J9YY10 115 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 LDB3O75112 727 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 PRKRAO75569 313 aaKnown RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 WISP3O95389 354 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 GPX2P18283 190 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 DRD3P35462 400 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 POLR2IP36954 125 aaKnown RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 SLC19A1P41440 591 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 HLCSP50747 726 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 VLDLRP98155 873 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-202ENST00000399804 SLC36A3Q495N2 470 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 FLYWCH1Q4VC44 716 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 LINC00471Q8N535 108 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 OR9Q2Q8NGE9 314 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 TM4SF18Q96CE8 201 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 SERINC2Q96SA4 455 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 A0A1W2PPW3 197 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 B4GAT1O43505 415 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 RDH16O75452 317 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 CXCL12P48061 93 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 SMSP52788 366 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 LGALS3BPQ08380 585 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 LSAMPQ13449 338 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 ENPP2Q13822 863 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 GINS1Q14691 196 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 COX20Q5RI15 118 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 HORMAD2Q8N7B1 307 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 PATE1Q8WXA2 126 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 LRRC37A2A6NM11 1700 aa13.29□□□□□ -0.28
SCAF4-202ENST00000399804 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 H0YGG7 62 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ARF3P61204 181 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 SYPL1Q16563 259 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 FAM71E1Q6IPT2 247 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 RNF111Q6ZNA4 994 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 KIAA1958Q8N8K9 716 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ATP6V1C2Q8NEY4 427 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 CXorf36Q9H7Y0 433 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ABCB10Q9NRK6 738 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 POT1Q9NUX5 634 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 C2CD4DB7Z1M9 353 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 SGK494L7N484 410 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 AIFM1O95831 613 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TFPIP10646 304 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 UGT2B7P16662 529 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TALDO1P37837 337 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 BCL6P41182 706 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TRA2BP62995 288 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 YBX1P67809 324 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 DLX2Q07687 328 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 HSDL2Q6YN16 418 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 CROCCP3Q8IVE0 287 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 MMP21Q8N119 569 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ZNF248Q8NDW4 579 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PHF7Q9BWX1 381 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 EHD3Q9NZN3 535 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ERVK-18Q9QC07 812 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 MYO16Q9Y6X6 1858 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PRAMEF33A0A0G2JMD5 474 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 IRGMA1A4Y4 181 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 FRS3O43559 492 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 CD22P20273 847 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PKLRP30613 574 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms