RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 NUDT1P36639 197 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 CTSOP43234 321 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
APOB-202ENST00000399256 KCNC3Q14003 757 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 LRRC32Q14392 662 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 GINS1Q14691 196 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 BPHLQ86WA6 291 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 HORMAD2Q8N7B1 307 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 ASZ1Q8WWH4 475 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 C19orf43Q9BQ61 176 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 MED18Q9BUE0 208 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 CXorf36Q9H7Y0 433 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 COQ3Q9NZJ6 369 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 INMT-MINDY4F8WBC2 141 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 RFXAPO00287 272 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 FAAHO00519 579 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SH3BP5O60239 455 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 NAT1P18440 290 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 CTBP2P56545 445 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 ALDH6A1Q02252 535 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 INSL4Q14641 139 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 RNLSQ5VYX0 342 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 LHX8Q68G74 356 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 ACSM5Q6NUN0 579 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 UNC5DQ6UXZ4 953 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 RNF180Q86T96 592 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 C9orf62Q8N4C0 152 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 OR2AP1Q8NGE2 309 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SLC38A5Q8WUX1 472 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 AKAP1Q92667 903 aaKnown RBP eCLIP13.26□□□□□ -0.29
APOB-202ENST00000399256 PHF21AQ96BD5 680 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TMEM19Q96HH6 336 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 LYSMD1Q96S90 227 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TMEM43Q9BTV4 400 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SORBS1Q9BX66 1292 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 H7C4K7 107 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 NME6O75414 186 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 IL3P08700 152 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 MAPK8P45983 427 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SPINT3P49223 89 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 DGKGP49619 791 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 AGFG1P52594 562 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 PIN1Q13526 163 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 SLBPQ14493 270 aaKnown RBP eCLIP13.26□□□□□ -0.29
APOB-202ENST00000399256 FAM92BQ6ZTR7 304 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 FAM20CQ8IXL6 584 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 DTX3Q8N9I9 347 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TMEM163Q8TC26 289 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SLC7A13Q8TCU3 470 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 UFD1Q92890 307 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SENP5Q96HI0 755 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 ATF6BQ99941 703 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TMED9Q9BVK6 235 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 ZDHHC6Q9H6R6 413 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 B4GALT6Q9UBX8 382 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 TESQ9UGI8 421 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 GPR52Q9Y2T5 361 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 PCDHGB7Q9Y5F8 929 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 SGTAO43765 313 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 SLC43A1O75387 559 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 KLHL18O94889 574 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 UBL4AP11441 157 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 AP2S1P53680 142 aaPredicted RBP13.25□□□□□ -0.29
APOB-202ENST00000399256 PDE7AQ13946 482 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 FAM205BPQ63HN1 556 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 SLCO4C1Q6ZQN7 724 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 FAM26EQ8N5C1 309 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
APOB-202ENST00000399256 RNFT2Q96EX2 444 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 NLNQ9BYT8 704 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 SLC6A16Q9GZN6 736 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.25□□□□□ -0.29
APOB-202ENST00000399256 TBC1D17Q9HA65 648 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 DIABLOQ9NR28 239 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 ANKDD1BA6NHY2 528 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 STK25O00506 426 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 FABP7O15540 132 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
APOB-202ENST00000399256 CD70P32970 193 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 LMAN2Q12907 356 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 FAM71E1Q6IPT2 247 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 HMGN2P46Q86SG4 172 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 GLRX5Q86SX6 157 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 C2orf15Q8WU43 125 aaKnown RBP13.25□□□□□ -0.29
APOB-202ENST00000399256 VOPP1Q96AW1 172 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 SOSTQ9BQB4 213 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
APOB-202ENST00000399256 CTPS2Q9NRF8 586 aa13.25□□□□□ -0.29
APOB-202ENST00000399256 B8ZZF3 427 aa13.24□□□□□ -0.29
APOB-202ENST00000399256 GTPBP1O00178 669 aaKnown RBP13.24□□□□□ -0.29
APOB-202ENST00000399256 SHOXO15266 292 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms