RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 G3BP2Q9UN86 482 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-204ENST00000398519 ERVK-19Q9WJR5 959 aa16.17■□□□□ 0.18
CSNK1D-204ENST00000398519 BOD1L1Q8NFC6 3051 aa16.17■□□□□ 0.18
CSNK1D-204ENST00000398519 TRBV11-1A0A0K0K1C0 115 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 PDPK1O15530 556 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 LAMP1P11279 417 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 MPIP34949 423 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 FRKP42685 505 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 NCBP2P52298 156 aaKnown RBP eCLIP16.16■□□□□ 0.181e-11■■□□□ 12.6
CSNK1D-204ENST00000398519 UFM1P61960 85 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 AP2B1P63010 937 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■□□ 16.8
CSNK1D-204ENST00000398519 GSTA3Q16772 222 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 PDCD4Q53EL6 469 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 ZNF628Q5EBL2 1059 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 CPTPQ5TA50 214 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 JMJD6Q6NYC1 403 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 CAMKMTQ7Z624 323 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 SIRT6Q8N6T7 355 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 COQ8BQ96D53 544 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 AMDHD1Q96NU7 426 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 TMEM120AQ9BXJ8 343 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 GLIPR2Q9H4G4 154 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 ZNF552Q9H707 407 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 SDR39U1Q9NRG7 319 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 LHX6Q9UPM6 363 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 CROCCQ5TZA2 2017 aa16.16■□□□□ 0.18
CSNK1D-204ENST00000398519 CACNA1BQ00975 2339 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 ERVH48-1M5A8F1 160 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 CLPSP04118 112 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 SSTR4P31391 388 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 CLCN2P51788 898 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 SEC24CP53992 1094 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 GNGT1P63211 74 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 MRPS35P82673 323 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 MAP4K2Q12851 820 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 IRAK1BP1Q5VVH5 260 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 FAM111BQ6SJ93 734 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 PCSK4Q6UW60 755 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 VWA5B2Q8N398 1253 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 ZNF675Q8TD23 568 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 TESCQ96BS2 214 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 CTHRC1Q96CG8 243 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 ART5Q96L15 291 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 PRPF18Q99633 342 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 SLC25A23Q9BV35 468 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 CLMPQ9H6B4 373 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 COPS7AQ9UBW8 275 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 MAPRE3Q9UPY8 281 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 PCDHGA9Q9Y5G4 932 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 DOCK10Q96BY6 2186 aa16.15■□□□□ 0.18
CSNK1D-204ENST00000398519 C9JVG2 144 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 MKRN2OSH3BPM6 223 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 PRKNO60260 465 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 PCSK2P16519 638 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 DDX5P17844 614 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 S1PR1P21453 382 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 IL12AP29459 219 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 CLNS1AP54105 237 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 FUT7Q11130 342 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 KCNAB2Q13303 367 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 RPS6KA2Q15349 733 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 C6orf163Q5TEZ5 329 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 B3GNTL1Q67FW5 361 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 H3F3CQ6NXT2 135 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 ZNF551Q7Z340 670 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 SIMC1Q8NDZ2 872 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 KAT2AQ92830 837 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 ZBED6CLQ96FA7 236 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 ABHD17AQ96GS6 310 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 RILPQ96NA2 401 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 BHLHE41Q9C0J9 482 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 ATAD3AQ9NVI7 634 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 PTGFRNQ9P2B2 879 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 ZNF639Q9UID6 485 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 BSNQ9UPA5 3926 aa16.14■□□□□ 0.17
CSNK1D-204ENST00000398519 PIEZO2Q9H5I5 2752 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 A8MUI8 341 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 SOX11P35716 441 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 SLC37A1P57057 533 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 HSPB3Q12988 150 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 DUSP8Q13202 625 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 PGS1Q32NB8 556 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 TRMT12Q53H54 448 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 CRB2Q5IJ48 1285 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 AGAP7PQ5VUJ5 663 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 FCRLBQ6BAA4 426 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 HSDL2Q6YN16 418 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 C9orf40Q8IXQ3 194 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 ZNF615Q8N8J6 731 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 EXD3Q8N9H8 876 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 AGAP4Q96P64 663 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 SMAD5Q99717 465 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 NPAS2Q99743 824 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 DUSP26Q9BV47 211 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 DEFB126Q9BYW3 111 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 ADNPQ9H2P0 1102 aa16.13■□□□□ 0.17
CSNK1D-204ENST00000398519 ANKRA2Q9H9E1 313 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms