RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRIM49CP0CI26 452 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 FUT1P19526 365 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 AKT2P31751 481 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 MAGEA4P43358 317 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 PGFP49763 221 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ZNF131P52739 623 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 NLRP11P59045 1033 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 RPS27AP62979 156 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 SRPXP78539 464 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ELAVL2Q12926 359 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 SNX1Q13596 522 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 KLF5Q13887 457 aaPredicted RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 FASTKQ14296 549 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 CCL14Q16627 93 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 LRIT3Q3SXY7 679 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 AGKQ53H12 422 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 C2CD6Q53TS8 623 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 WDR25Q64LD2 544 aaPredicted RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 RTL6Q6ICC9 239 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ZNF730Q6ZMV8 503 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 PAQR9Q6ZVX9 377 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ERC1Q8IUD2 1116 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 LRRC17Q8N6Y2 441 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 Q8NBF4 154 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ZNRF1Q8ND25 227 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 CHDHQ8NE62 594 aaPredicted RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 OR52B6Q8NGF0 335 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 OR1B1Q8NGR6 318 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 PCNPQ8WW12 178 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 NCLNQ969V3 563 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 NTNG2Q96CW9 530 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 SLC45A3Q96JT2 553 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 RCHY1Q96PM5 261 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 C19orf43Q9BQ61 176 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 NDUFAF3Q9BU61 184 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 WRAP53Q9BUR4 548 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 RAB11FIP5Q9BXF6 653 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 OCR1Q9BZK8 76 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 KRT23Q9C075 422 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 UPF3AQ9H1J1 476 aaKnown RBP2.24□□□□□ -2.05
CD47-203ENST00000398258 Q9HAA7 133 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 WDR41Q9HAD4 459 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 DEPPQ9NTK1 212 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 HPF1Q9NWY4 346 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 SOHLH2Q9NX45 425 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ERVK-18Q9QC07 812 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 COPS7AQ9UBW8 275 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 MIOXQ9UGB7 285 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 IL20RAQ9UHF4 553 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 ATP6V0A2Q9Y487 856 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 CACNA1FO60840 1977 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 KIF7Q2M1P5 1343 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CUX2O14529 1486 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SYNJ2O15056 1496 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 KRTAP16-1A8MUX0 517 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 F8WDY8 70 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 H7C423 109 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SH2D1BO14796 132 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ADAM12O43184 909 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 B3GALNT1O75752 331 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ANXA9O76027 345 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 STK17BO94768 372 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 TOXO94900 526 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 HPRP00739 348 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 HCKP08631 526 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 MBL2P11226 248 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 DPEP1P16444 411 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 PPP2R1AP30153 589 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ACADSBP45954 432 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SLC1A6P48664 564 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CAMLGP49069 296 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NPY2RP49146 381 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NAAAQ02083 359 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SPP2Q13103 211 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CLPPQ16740 277 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 HKDC1Q2TB90 917 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF699Q32M78 642 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 GLIPR1L2Q4G1C9 344 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 TAF1BQ53T94 588 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 DCAF12Q5T6F0 453 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 LINC00242Q5T6M2 205 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 METTL7BQ6UX53 244 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 GET4Q7L5D6 327 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 CATSPER4Q7RTX7 472 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NUFIP2Q7Z417 695 aaKnown RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 BNIPLQ7Z465 357 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SH2D6Q7Z4S9 175 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ADCK1Q86TW2 530 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 RPAINQ86UA6 219 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 RANBP3LQ86VV4 465 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 AMZ2Q86W34 360 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 KCNMB4Q86W47 210 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 FAM131BQ86XD5 332 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF781Q8N8C0 355 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF397Q8NF99 534 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 OR1K1Q8NGR3 316 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 FLVCR1-AS1Q8TAF5 88 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NPRL2Q8WTW4 380 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms