RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SIGLEC12Q96PQ1 595 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 TUBB1Q9H4B7 451 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 HEY2Q9UBP5 337 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 HAO1Q9UJM8 370 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 ERVK-19Q9WJR5 959 aa13.25□□□□□ -0.29
HDDC2-202ENST00000398153 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
HDDC2-202ENST00000398153 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 A8MVJ9 347 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 PRKNO60260 465 aaPredicted RBP13.24□□□□□ -0.29
HDDC2-202ENST00000398153 SLC25A12O75746 678 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 OR2J2O76002 312 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 F10P00742 488 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 LINC00032P0C843 101 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 EDN3P14138 238 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 DDX5P17844 614 aaKnown RBP13.24□□□□□ -0.29
HDDC2-202ENST00000398153 NT5EP21589 574 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 MAPK1P28482 360 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ASMTP46597 345 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 C2orf80Q0P641 193 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 SMU1Q2TAY7 513 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 PRICKLE4Q2TBC4 344 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 XKR7Q5GH72 579 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 PIGGQ5H8A4 983 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 FAM71E1Q6IPT2 247 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 TRIM42Q8IWZ5 723 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 C9orf40Q8IXQ3 194 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 CYP4Z2PQ8N1L4 340 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 VWA5B2Q8N398 1253 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 GOLM1Q8NBJ4 401 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 POGLUT1Q8NBL1 392 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 SLC22A8Q8TCC7 542 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF675Q8TD23 568 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 GRHL3Q8TE85 626 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ASB15Q8WXK1 588 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 CTHRC1Q96CG8 243 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 CNRIP1Q96F85 164 aaPredicted RBP13.24□□□□□ -0.29
HDDC2-202ENST00000398153 RASL10BQ96S79 203 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 EBPLQ9BY08 206 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 OR10A5Q9H207 317 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 CLMPQ9H6B4 373 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 MIEF1Q9NQG6 463 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 SLC35C2Q9NQQ7 365 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 HPF1Q9NWY4 346 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ANKRD10Q9NXR5 420 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 NKIRAS1Q9NYS0 192 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 MAP10Q9P2G4 905 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF639Q9UID6 485 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 ENTPD4Q9Y227 616 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 KLF13Q9Y2Y9 288 aaPredicted RBP13.24□□□□□ -0.29
HDDC2-202ENST00000398153 FIS1Q9Y3D6 152 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
HDDC2-202ENST00000398153 TENM4Q6N022 2769 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 WDR91A4D1P6 747 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ASPDHA6ND91 283 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 WWP2O00308 870 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 PIP5K1BO14986 540 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 NME2P1O60361 137 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 TBX19O60806 448 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 IFI6P09912 130 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 H2AFXP16104 143 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 PCSK2P16519 638 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 NME2P22392 152 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ARRB2P32121 409 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 FEN1P39748 380 aaKnown RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 SLC1A6P48664 564 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 RPL14P50914 215 aaKnown RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 PSPHP78330 225 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 MAD2L1Q13257 205 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 STX3Q13277 289 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 EBPQ15125 230 aaKnown RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 PRR30Q53SZ7 412 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF468Q5VIY5 522 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF324BQ6AW86 544 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 LRRC34Q8IZ02 419 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ZNF615Q8N8J6 731 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ST6GALNAC3Q8NDV1 305 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 OR2T11Q8NH01 316 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 MTERF3Q96E29 417 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 C19orf60Q96EN9 201 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 WWTR1Q9GZV5 400 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 OLAHQ9NV23 265 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
HDDC2-202ENST00000398153 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
HDDC2-202ENST00000398153 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 CROCCQ5TZA2 2017 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 MYO1GB0I1T2 1018 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 TMEM233B4DJY2 109 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 TCP11X1B4DZS4 312 aa13.22□□□□□ -0.29
HDDC2-202ENST00000398153 HRKO00198 91 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms