RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NUF2Q9BZD4 464 aa19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.69■□□□□ 0.742e-7■■■■■ 28.9
TSPAN4-206ENST00000397408 LIN28AQ9H9Z2 209 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 SLAMF7Q9NQ25 335 aa19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 ANKRD10Q9NXR5 420 aa19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 BAIAP2L1Q9UHR4 511 aa19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 EXO1Q9UQ84 846 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-206ENST00000397408 FCHO1O14526 889 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 SORBS2O94875 1100 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 LRATO95237 230 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 TNFSF10P50591 281 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 RNF4P78317 190 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 LTB4RQ15722 352 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 PLEKHN1Q494U1 663 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 RNF111Q6ZNA4 994 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 C16orf47Q6ZP98 133 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 C9orf40Q8IXQ3 194 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 SAMD14Q8IZD0 417 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 ARMC10Q8N2F6 343 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 OR8K3Q8NH51 312 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 UTP23Q9BRU9 249 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 BRINP2Q9C0B6 783 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 EPN3Q9H201 632 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 TMEM200CA6NKL6 621 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 AKAP10O43572 662 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 SLC28A2O43868 658 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 KITP10721 976 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 SSTR4P31391 388 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 TUBA3CQ13748 450 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 ZNF169Q14929 603 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 PRSS53Q2L4Q9 553 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 PRICKLE4Q2TBC4 344 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 TUBA3EQ6PEY2 450 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 CCDC116Q8IYX3 515 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 VWA5B2Q8N398 1253 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 LIX1Q8N485 282 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 ADCY4Q8NFM4 1077 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 LRRC8CQ8TDW0 803 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 INTS9Q9NV88 658 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 MAT2BQ9NZL9 334 aa19.68■□□□□ 0.74
TSPAN4-206ENST00000397408 TRAV17A0A0B4J275 112 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 WWP2O00308 870 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 ITGA10O75578 1167 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 CLPSP04118 112 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 ASMTP46597 345 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 SLC37A1P57057 533 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 OC90Q02509 493 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 FUT7Q11130 342 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 IL23RQ5VWK5 629 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 ANKRD26P1Q6NSI1 321 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 FAM111BQ6SJ93 734 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 OR5L2Q8NGL0 311 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 BBS4Q96RK4 519 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 AKTIPQ9H8T0 292 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 MEAF6Q9HAF1 191 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 MYOTQ9UBF9 498 aa19.67■□□□□ 0.74
TSPAN4-206ENST00000397408 TTLL8A6PVC2 850 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 HDAC3O15379 428 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 OR2J2O76002 312 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 NTSP30990 170 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 CD96P40200 585 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 MGAT2Q10469 447 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 MAD2L1Q13257 205 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 PTGR1Q14914 329 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 CEBPEQ15744 281 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 ZNF468Q5VIY5 522 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 SLC29A4Q7RTT9 530 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 ZNF605Q86T29 641 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 FAM9CQ8IZT9 166 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 OR9A2Q8NGT5 310 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 SUN3Q8TAQ9 357 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 NUBPLQ8TB37 319 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 GAL3ST4Q96RP7 486 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 REEP4Q9H6H4 257 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 TAS2R7Q9NYW3 318 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 EIF3LQ9Y262 564 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 PCDHGA10Q9Y5H3 936 aa19.66■□□□□ 0.74
TSPAN4-206ENST00000397408 PRPS2P11908 318 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 PCSK2P16519 638 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 SSR4P51571 173 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 MRPS35P82673 323 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 EMX2Q04743 252 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 MAP4K2Q12851 820 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 EBPQ15125 230 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 OR1C1Q15619 314 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 TMEM156Q8N614 296 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 ZNF675Q8TD23 568 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 PPCDCQ96CD2 204 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 ZNF764Q96H86 408 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 SIGLEC12Q96PQ1 595 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 WWTR1Q9GZV5 400 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 OR10A5Q9H207 317 aa19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 NOP53Q9NZM5 478 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 YARS2Q9Y2Z4 477 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 SPENQ96T58 3664 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-206ENST00000397408 OR6C76A6NM76 312 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 MYO1GB0I1T2 1018 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 SLCO1B7G3V0H7 640 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 SDHDO14521 159 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms