RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 KCNK12Q9HB15 430 aa22.5■■□□□ 1.19
PABPN1-202ENST00000397276 LOC100506127A0A0U1RQW1 187 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 LRIT2A6NDA9 550 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 METTL15A6NJ78 407 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 DSCR3O14972 297 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 NDUFB5O43674 189 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 SOX14O95416 240 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 IGFBP1P08833 259 aaPredicted RBP22.49■■□□□ 1.19
PABPN1-202ENST00000397276 C5AR1P21730 350 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 FEN1P39748 380 aaKnown RBP22.49■■□□□ 1.19
PABPN1-202ENST00000397276 RAB28P51157 221 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 VASH1Q7L8A9 365 aaPredicted RBP22.49■■□□□ 1.19
PABPN1-202ENST00000397276 LACC1Q8IV20 430 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 STX19Q8N4C7 294 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 OR8K5Q8NH50 307 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 MYADMQ96S97 322 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 TRPV4Q9HBA0 871 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 HEATR5BQ9P2D3 2071 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 CEACAM5P06731 702 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 C8orf89P0DMQ9 161 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 BCL6P41182 706 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 LIMS1P48059 325 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 CRISP3P54108 245 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 ERVK-21P61565 698 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 OR4D11Q8NGI4 311 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 OR52E1Q8NGJ3 308 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 CREB3L4Q8TEY5 395 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 ITPAQ9BY32 194 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 ROGDIQ9GZN7 287 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 GLIPR2Q9H4G4 154 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 NEK6Q9HC98 313 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 WDR70Q9NW82 654 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 OBP2AQ9NY56 170 aa22.49■■□□□ 1.19
PABPN1-202ENST00000397276 C4orf51C9J302 202 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 ST3GAL4Q11206 333 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 CCBE1Q6UXH8 406 aaPredicted RBP22.48■■□□□ 1.19
PABPN1-202ENST00000397276 GDPD3Q7L5L3 318 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 PARP16Q8N5Y8 322 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 MYDGFQ969H8 173 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 PBX4Q9BYU1 374 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 MRPS30Q9NP92 439 aaKnown RBP22.48■■□□□ 1.19
PABPN1-202ENST00000397276 SEC14L3Q9UDX4 400 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 PRAMEF27A3QJZ7 478 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 ERI3O43414 337 aaKnown RBP22.48■■□□□ 1.19
PABPN1-202ENST00000397276 HSMCR30P0CW71 290 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 CBLP22681 906 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 CHMP24386 653 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 HMGA2P52926 109 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 SEC23BQ15437 767 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 TIGD6Q17RP2 521 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 UAP1L1Q3KQV9 507 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 TCTN3Q6NUS6 607 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 UBE2Q1Q7Z7E8 422 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 OR51I1Q9H343 314 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 A4GALTQ9NPC4 353 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 C11orf16Q9NQ32 467 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 ZCCHC3Q9NUD5 404 aaKnown RBP22.48■■□□□ 1.19
PABPN1-202ENST00000397276 FBXW2Q9UKT8 454 aa22.48■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3DA0A087WVF3 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3IA0A087WXS9 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3EA0A087X179 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3KA0A087X1G2 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3FA6NER0 549 aaPredicted RBP22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3LB9A6J9 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 ADH1BP00325 375 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 CDK1P06493 297 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3HP0C7X1 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 NCBP2P52298 156 aaKnown RBP eCLIP22.47■■□□□ 1.198e-21■□□□□ 9.8
PABPN1-202ENST00000397276 CSNK2BP67870 215 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TPRG1LQ5T0D9 272 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 UBE2UQ5VVX9 321 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3GQ6DHY5 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3CQ6IPX1 549 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TBC1D3Q8IZP1 549 aaPredicted RBP22.47■■□□□ 1.19
PABPN1-202ENST00000397276 FBXL6Q8N531 539 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 SLC38A4Q969I6 547 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 IL4I1Q96RQ9 567 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 CDADC1Q9BWV3 514 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 SLC17A9Q9BYT1 436 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 SPHK1Q9NYA1 384 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 A0A1W2PS29 197 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 PGRMC2O15173 223 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 CNR2P34972 360 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 KIAA1161Q6NSJ0 714 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 DEPDC4Q8N2C3 294 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 TREX2Q9BQ50 279 aaPredicted RBP22.47■■□□□ 1.19
PABPN1-202ENST00000397276 DDX31Q9H8H2 851 aaKnown RBP22.47■■□□□ 1.19
PABPN1-202ENST00000397276 CTPS2Q9NRF8 586 aa22.47■■□□□ 1.19
PABPN1-202ENST00000397276 COL4A3Q01955 1670 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 CLDN24A6NM45 220 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 HAT1O14929 419 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 DYRK3O43781 588 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 OR10H3O60404 316 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 NME6O75414 186 aaPredicted RBP22.46■■□□□ 1.19
PABPN1-202ENST00000397276 GABRB1P18505 474 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 RAB8AP61006 207 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 SLAMF1Q13291 335 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 GPR19Q15760 415 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 PTCHD4Q6ZW05 846 aa22.46■■□□□ 1.19
PABPN1-202ENST00000397276 B3GNT7Q8NFL0 401 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms