RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 LGI1O95970 557 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 NR2C2APQ86WQ0 139 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ZNF547Q8IVP9 402 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 VWA5B2Q8N398 1253 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
NUP98-204ENST00000397004 RNF121Q9H920 327 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 PRM3Q9NNZ6 103 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ALAS2P22557 587 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ALDH9A1P49189 494 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 MEDAGQ5VYS4 303 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 VASNQ6EMK4 673 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ANKRD53Q8N9V6 530 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 UBASH3BQ8TF42 649 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 EGLN3Q9H6Z9 239 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SPEGQ15772 3267 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 LEFTY2O00292 366 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SPINT1O43278 529 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 DGKGP49619 791 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SNRPD2P62316 118 aaKnown RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 OCLNQ16625 522 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SYTL3Q4VX76 610 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SMUG1Q53HV7 270 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 TPGS2Q68CL5 300 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 XKRXQ6PP77 449 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 OR8D4Q8NGM9 314 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 NEURL3Q96EH8 262 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ICKQ9UPZ9 632 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SPIN1Q9Y657 262 aaPredicted RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 IL1AP01583 271 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 TFPIP10646 304 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 KCNJ5P48544 419 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SCN1BQ07699 218 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 NFE2L1Q14494 772 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 HEPACAMQ14CZ8 416 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 TATDN3Q17R31 274 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ERAP2Q6P179 960 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 FAM26EQ8N5C1 309 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 GLYATL1Q969I3 302 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SLC22A4Q9H015 551 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 POLMQ9NP87 494 aaPredicted RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 FBXW2Q9UKT8 454 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 DIMT1Q9UNQ2 313 aaKnown RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 CATP04040 527 aaKnown RBP13.18□□□□□ -0.3
NUP98-204ENST00000397004 SOD2P04179 222 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 DCST1Q5T197 706 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ZNF730Q6ZMV8 503 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 KRT73Q86Y46 540 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 TRAM1L1Q8N609 369 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 SSR3Q9UNL2 185 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
NUP98-204ENST00000397004 ANKDD1BA6NHY2 528 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 HPGDSO60760 199 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 TMCC2O75069 709 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 CPNE3O75131 537 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 NME6O75414 186 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 EPHX1P07099 455 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 UQCRC2P22695 453 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 WEE1P30291 646 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 VIPR1P32241 457 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 DCDC1P59894 354 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 MAP4K2Q12851 820 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 HSPB3Q12988 150 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 RAB33AQ14088 237 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 JPH3Q8WXH2 748 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 A4GALTQ9NPC4 353 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 ALG5Q9Y673 324 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 OR6C70A6NIJ9 312 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 H1F0P07305 194 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 GIPRP48546 466 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms