RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ADIGQ0VDE8 80 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PUM1Q14671 1186 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■□□□□ 8.5
NDE1-202ENST00000396355 TAF13Q15543 124 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TCTE1Q5JU00 501 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 NCMAPQ5T1S8 102 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SYPL2Q5VXT5 272 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 HFE2Q6ZVN8 426 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 LINGO2Q7L985 606 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CCDC71Q8IV32 467 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 ACVR1CQ8NER5 493 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PHOSPHO1Q8TCT1 267 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CNDP2Q96KP4 475 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 TSSK3Q96PN8 268 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ACBD6Q9BR61 282 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 DNMT3BQ9UBC3 853 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 HIF3AQ9Y2N7 669 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 NUP214P35658 2090 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 CACNA1DQ01668 2161 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 FAM234BA2RU67 622 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TRABD2BA6NFA1 517 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 GPR31O00270 319 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 BET1O15155 118 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 STX11O75558 287 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 FGF18O76093 207 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 B3GAT3O94766 335 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 LALBAP00709 142 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C1RP00736 705 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 S100A8P05109 93 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 LTA4HP09960 611 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 S100A3P33764 101 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 DCTP40126 519 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 GPM6BQ13491 265 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RSU1Q15404 277 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 FAM174BQ3ZCQ3 159 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C4orf46Q504U0 113 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SLC29A4Q7RTT9 530 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 DEFB106AQ8N104 65 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZNF567Q8N184 647 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZNF433Q8N7K0 673 aaPredicted RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 DNAJB3Q8WWF6 145 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RFT1Q96AA3 541 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 CDK15Q96Q40 435 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TMEM209Q96SK2 561 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZNF649Q9BS31 505 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C20orf24Q9BUV8 137 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ATP13A1Q9HD20 1204 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TMEM30AQ9NV96 361 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RBFOX1Q9NWB1 397 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 PKP3Q9Y446 797 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 COL6A3P12111 3177 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 H7C0S8 307 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 MLYCDO95822 493 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 PTHP01270 115 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RRASP10301 218 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZP3P21754 424 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 NMBRP28336 390 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ACSL1P33121 698 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OMPP47874 163 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SLC11A2P49281 568 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 EIF4HQ15056 248 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 PAGE3Q5JUK9 113 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SAXO2Q658L1 398 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 CDC73Q6P1J9 531 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 PAQR9Q6ZVX9 377 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TRAPPC5Q8IUR0 188 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 POGLUT1Q8NBL1 392 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZMIZ2Q8NF64 920 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR14K1Q8NGZ2 314 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR4C6Q8NH72 309 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 BLOC1S5Q8TDH9 187 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TSPEARQ8WU66 669 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR2M4Q96R27 311 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RAD9AQ99638 391 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ATG101Q9BSB4 218 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SPON2Q9BUD6 331 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 TRIM54Q9BYV2 358 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 MTG2Q9H4K7 406 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 GLOD4Q9HC38 313 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RGS18Q9NS28 235 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 PIGVQ9NUD9 493 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 NDRG2Q9UN36 371 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 INSL6Q9Y581 213 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZFHX2Q9C0A1 2572 aaPredicted RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 A0A1W2PPK0 400 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 PIRO00625 290 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SLC22A2O15244 555 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR10H3O60404 316 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RAD1O60671 282 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ANXA2P07355 339 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 MMP3P08254 477 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C7P10643 843 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 RPS2P15880 293 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 RPS19P39019 145 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 MATKP42679 507 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 BIKQ13323 160 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SNTB2Q13425 540 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms