RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LIN7BQ9HAP6 207 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CYP4F12Q9HCS2 524 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RANGRFQ9HD47 186 aaPredicted RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLC35C2Q9NQQ7 365 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 THSD1Q9NS62 852 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 DCAF13Q9NV06 445 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 EXD2Q9NVH0 621 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 WWOXQ9NZC7 414 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLAMF8Q9P0V8 285 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 VPS29Q9UBQ0 182 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ZMAT5Q9UDW3 170 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 CD207Q9UJ71 328 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 EXO1Q9UQ84 846 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 LYVE1Q9Y5Y7 322 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 EML5Q05BV3 1969 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 LRRC14BA6NHZ5 514 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 M0R082 166 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RGS10O43665 173 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 AIREO43918 545 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 FADS2O95864 444 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 ONECUT2O95948 504 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CST1P01037 141 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CLEC2LP0C7M8 214 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ACADMP11310 421 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TIA1P31483 386 aaKnown RBP eCLIP5.09□□□□□ -1.597e-7■□□□□ 9.3
VPS41-203ENST00000395969 FMO3P31513 532 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 DCTP40126 519 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 GCGRP47871 477 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 HMGA2P52926 109 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CDH13P55290 713 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ITGA1P56199 1179 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PCBP3P57721 371 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 FZD5Q13467 585 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 EFR3AQ14156 821 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 NFATC4Q14934 902 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PTPRRQ15256 657 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SMAD2Q15796 467 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 C6orf132Q5T0Z8 1188 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 IER5LQ5T953 404 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 MED27Q6P2C8 311 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PARM1Q6UWI2 310 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SUSD1Q6UWL2 747 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RFLNAQ6ZTI6 216 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CREB3L2Q70SY1 520 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SYT13Q7L8C5 426 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SPRED2Q7Z698 418 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 FAM86B1Q8N7N1 296 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 LMNTD1Q8N9Z9 388 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 LHFPL5Q8TAF8 219 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CYB5D2Q8WUJ1 264 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 APOBEC4Q8WW27 367 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 NR4A3Q92570 626 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 FCGR1BQ92637 280 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 MOAP1Q96BY2 351 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 FYTTD1Q96QD9 318 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 ACOX2Q99424 681 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 APOL4Q9BPW4 351 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 C17orf62Q9BQA9 187 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RHNO1Q9BSD3 238 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SEMA4BQ9NPR2 832 aaPredicted RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 TMEM184CQ9NVA4 438 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 INTS7Q9NVH2 962 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 SCN3BQ9NY72 215 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 B3GNT2Q9NY97 397 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLC25A37Q9NYZ2 338 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 OR6C2Q9NZP2 312 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 GIMAP2Q9UG22 337 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 NDOR1Q9UHB4 597 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 BTBD3Q9Y2F9 522 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PTGDR2Q9Y5Y4 395 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 A0A0A6YYD5 115 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 IQCF5A8MTL0 148 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 DFNA5O60443 496 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 NOS1APO75052 506 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 ALPPP05187 535 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 LCKP06239 509 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 G6PDP11413 515 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 DRD2P14416 443 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 AKT1P31749 480 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 UQCRC1P31930 480 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 LIMS1P48059 325 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 HSPA7P48741 367 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 HTR6P50406 440 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 UFM1P61960 85 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 IL5RAQ01344 420 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ALDH6A1Q02252 535 aaKnown RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 MESP2Q0VG99 397 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 GTF2H3Q13889 308 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ZNF267Q14586 743 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 IRF3Q14653 427 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 NOXRED1Q6NXP6 359 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 UBE2J2Q8N2K1 259 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 OR4M2Q8NGB6 313 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SLC5A11Q8WWX8 675 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SMPDL3AQ92484 453 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SLC39A7Q92504 469 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 FGF14Q92915 247 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TUBGCP3Q96CW5 907 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 QRFPRQ96P65 431 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms