RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 HAS2Q92819 552 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 GFM2Q969S9 779 aaKnown RBP15.39■□□□□ 0.05
CXCL1-201ENST00000395761 TSSK3Q96PN8 268 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 SIKE1Q9BRV8 207 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 C1orf50Q9BV19 199 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ANKRD10Q9NXR5 420 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ANAPC2Q9UJX6 822 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ERVK-19Q9WJR5 959 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 B3GNT3Q9Y2A9 372 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 WBP11Q9Y2W2 641 aaKnown RBP15.39■□□□□ 0.05
CXCL1-201ENST00000395761 HEMK1Q9Y5R4 338 aaPredicted RBP15.39■□□□□ 0.05
CXCL1-201ENST00000395761 DYTNA2CJ06 578 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 TRPC5OSA6NMA1 111 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 AKAP10O43572 662 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 LRATO95237 230 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 CLPSP04118 112 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 KITP10721 976 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 BCKDHAP12694 445 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 NT5EP21589 574 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 DRD4P21917 467 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 SOX18P35713 384 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 RNF4P78317 190 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 MGAT2Q10469 447 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 SPRED3Q2MJR0 410 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 ATP6AP1LQ52LC2 224 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF468Q5VIY5 522 aaPredicted RBP15.38■□□□□ 0.05
CXCL1-201ENST00000395761 HSDL2Q6YN16 418 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 CCDC116Q8IYX3 515 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 ARMC10Q8N2F6 343 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 ADCY4Q8NFM4 1077 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 PNPLA2Q96AD5 504 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 TUBGCP3Q96CW5 907 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 FBXL20Q96IG2 436 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 NUF2Q9BZD4 464 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 EPN3Q9H201 632 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 MEAF6Q9HAF1 191 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 SLC35C2Q9NQQ7 365 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 EHD3Q9NZN3 535 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 MARCOQ9UEW3 520 aaPredicted RBP15.38■□□□□ 0.05
CXCL1-201ENST00000395761 TMED5Q9Y3A6 229 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 USH1CQ9Y6N9 552 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF780BQ9Y6R6 833 aa15.38■□□□□ 0.05
CXCL1-201ENST00000395761 GABRR3A8MPY1 467 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 DYRK3O43781 588 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 SORBS2O94875 1100 aaKnown RBP15.37■□□□□ 0.05
CXCL1-201ENST00000395761 ATP1B1P05026 303 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 TROVE2P10155 538 aaKnown RBP eCLIP15.37■□□□□ 0.05
CXCL1-201ENST00000395761 S1PR1P21453 382 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 SSTR4P31391 388 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 CD96P40200 585 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 CASRP41180 1078 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 TNFSF10P50591 281 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 TUBA3CQ13748 450 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 LTB4RQ15722 352 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 IL23RQ5VWK5 629 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 CGB2Q6NT52 195 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 TUBA3EQ6PEY2 450 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 FAM111BQ6SJ93 734 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 EPGNQ6UW88 154 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 IKBIPQ70UQ0 350 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 PRICKLE2Q7Z3G6 844 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 MAVSQ7Z434 540 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 GALNT12Q8IXK2 581 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 C9orf40Q8IXQ3 194 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 LGI4Q8N135 537 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 LIX1Q8N485 282 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 FNDC5Q8NAU1 212 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 MAELQ96JY0 434 aaKnown RBP15.37■□□□□ 0.05
CXCL1-201ENST00000395761 RNF32Q9H0A6 362 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 AKTIPQ9H8T0 292 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 TAS2R7Q9NYW3 318 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 COPS7AQ9UBW8 275 aa15.37■□□□□ 0.05
CXCL1-201ENST00000395761 CPAMD8Q8IZJ3 1885 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF462Q96JM2 2506 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 OR5H15A6NDH6 313 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 WWP2O00308 870 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 VPS4BO75351 444 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 OR2J2O76002 312 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 MLLT10P55197 1068 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 SLC37A1P57057 533 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 FUT7Q11130 342 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 PRICKLE4Q2TBC4 344 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 ANKRD26P1Q6NSI1 321 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 LRRC25Q8N386 305 aaPredicted RBP15.36■□□□□ 0.05
CXCL1-201ENST00000395761 SIMC1Q8NDZ2 872 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 OR8K3Q8NH51 312 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 SUN3Q8TAQ9 357 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 NUDT8Q8WV74 236 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 ART5Q96L15 291 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 SIGLEC12Q96PQ1 595 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 BRINP2Q9C0B6 783 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 NSRP1Q9H0G5 558 aaKnown RBP15.36■□□□□ 0.05
CXCL1-201ENST00000395761 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.36■□□□□ 0.05
CXCL1-201ENST00000395761 SLAMF7Q9NQ25 335 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 MIEF1Q9NQG6 463 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 MAT2BQ9NZL9 334 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 ABI3Q9P2A4 366 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 MYOTQ9UBF9 498 aa15.36■□□□□ 0.05
CXCL1-201ENST00000395761 CNTRLQ7Z7A1 2325 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 MYO1GB0I1T2 1018 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms