RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CCDC116Q8IYX3 515 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 KIRREL3Q8IZU9 778 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 SUN3Q8TAQ9 357 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 NUDT8Q8WV74 236 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 ART5Q96L15 291 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 MEAF6Q9HAF1 191 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 EHD3Q9NZN3 535 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 HEMK1Q9Y5R4 338 aaPredicted RBP18.5■□□□□ 0.55
SNCA-203ENST00000394986 SPENQ96T58 3664 aaKnown RBP18.5■□□□□ 0.55
SNCA-203ENST00000394986 B8ZZF3 427 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 SDHDO14521 159 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ZFAND5O76080 213 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 MAPK1P28482 360 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 MGAT2Q10469 447 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 PRICKLE4Q2TBC4 344 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ZNF385BQ569K4 471 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ZNF468Q5VIY5 522 aaPredicted RBP18.49■□□□□ 0.55
SNCA-203ENST00000394986 Q6ZS92 163 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 PRICKLE2Q7Z3G6 844 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 Q8NA96 180 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 SIMC1Q8NDZ2 872 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 OR9A2Q8NGT5 310 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ANKRA2Q9H9E1 313 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 GIMAP4Q9NUV9 329 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 MAT2BQ9NZL9 334 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 B3GNT3Q9Y2A9 372 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 WBP11Q9Y2W2 641 aaKnown RBP18.49■□□□□ 0.55
SNCA-203ENST00000394986 GOLGA8QA0A0J9YX86 632 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 GOLGA8OA6NCC3 632 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 GOLGA8NF8WBI6 632 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 WWP2O00308 870 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 HDAC3O15379 428 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 SUV39H1O43463 412 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 PCSK2P16519 638 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 SLC37A1P57057 533 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 MRPS35P82673 323 aaKnown RBP18.49■□□□□ 0.55
SNCA-203ENST00000394986 TUBA3CQ13748 450 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 EXOSC7Q15024 291 aaKnown RBP18.49■□□□□ 0.55
SNCA-203ENST00000394986 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 TUBA3EQ6PEY2 450 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 RNF111Q6ZNA4 994 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 MAVSQ7Z434 540 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 VWA5B2Q8N398 1253 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 HAS2Q92819 552 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 PNPLA2Q96AD5 504 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 BBS4Q96RK4 519 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNCA-203ENST00000394986 REEP4Q9H6H4 257 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 WDR55Q9H6Y2 383 aaPredicted RBP18.49■□□□□ 0.55
SNCA-203ENST00000394986 SLAMF7Q9NQ25 335 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ABI3Q9P2A4 366 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 ANAPC2Q9UJX6 822 aa18.49■□□□□ 0.55
SNCA-203ENST00000394986 OR5H15A6NDH6 313 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 ITGA10O75578 1167 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 OR2J2O76002 312 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 G6PDP11413 515 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 S1PR1P21453 382 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 EPHA3P29320 983 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 CD96P40200 585 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 TNFSF10P50591 281 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 DIO3P55073 304 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 EMX2Q04743 252 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 C19orf57Q0VDD7 668 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 FUT7Q11130 342 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 DUSP8Q13202 625 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 CEBPEQ15744 281 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 MPEG1Q2M385 716 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 TRMT12Q53H54 448 aaKnown RBP18.48■□□□□ 0.55
SNCA-203ENST00000394986 ZNF628Q5EBL2 1059 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 LGI4Q8N135 537 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 ARMC10Q8N2F6 343 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
SNCA-203ENST00000394986 KRTCAP2Q8N6L1 136 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 KAT2AQ92830 837 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 CIDECQ96AQ7 238 aaPredicted RBP18.48■□□□□ 0.55
SNCA-203ENST00000394986 C7orf26Q96N11 449 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 SIGLEC12Q96PQ1 595 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 GAL3ST4Q96RP7 486 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 RNF32Q9H0A6 362 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 EPN3Q9H201 632 aa18.48■□□□□ 0.55
SNCA-203ENST00000394986 EIF3LQ9Y262 564 aaKnown RBP18.48■□□□□ 0.55
SNCA-203ENST00000394986 COL6A6A6NMZ7 2263 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 MYO1GB0I1T2 1018 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 SORBS2O94875 1100 aaKnown RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 PRPS2P11908 318 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 ASMTP46597 345 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 NCBP2P52298 156 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNCA-203ENST00000394986 OC90Q02509 493 aaPredicted RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 MAP4K2Q12851 820 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 PDE7AQ13946 482 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 SLC9B1Q4ZJI4 515 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 PRR30Q53SZ7 412 aaPredicted RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 SAMD14Q8IZD0 417 aaPredicted RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 ZNF615Q8N8J6 731 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 OR8K3Q8NH51 312 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 PIWIL2Q8TC59 973 aaKnown RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 PPCDCQ96CD2 204 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms