RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GPRC5BQ9NZH0 403 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MARCH4Q9P2E8 410 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MLXQ9UH92 298 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SCAMP2O15127 329 aaKnown RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 GPR37L1O60883 481 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 AK1P00568 194 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ARSAP15289 507 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 IL1RNP18510 177 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 UGT3A2Q3SY77 523 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 UNC50Q53HI1 259 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 C17orf99Q6UX52 265 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 WDTC1Q8N5D0 677 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 PROKR1Q8TCW9 393 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SLC30A2Q9BRI3 323 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 NALCNQ8IZF0 1738 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 GGT3PA6NGU5 568 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SLC19A2O60779 497 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CD3GP09693 182 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CEBPBP17676 345 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 HSD17B12Q53GQ0 312 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ABHD17BQ5VST6 288 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 KLHDC8AQ8IYD2 350 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 POGLUT1Q8NBL1 392 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CCDC86Q9H6F5 360 aaKnown RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 KCNK12Q9HB15 430 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 RXFP3Q9NSD7 469 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 KLHL21Q9UJP4 597 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CLEC4EQ9ULY5 219 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 LRRN3E7EW58 273 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ATP6V1G1O75348 118 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ERCC1P07992 297 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 HOXD8P13378 290 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ARSFP54793 590 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SIM1P81133 766 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 FGL2Q14314 439 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 FAM76BQ5HYJ3 339 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 MORN1Q5T089 497 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 MANEALQ5VSG8 457 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 LRRN3Q9H3W5 708 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SEC14L4Q9UDX3 406 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 PTGDR2Q9Y5Y4 395 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 DLG5Q8TDM6 1919 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 TAS2R38P59533 333 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 TRAM1Q15629 374 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 EIF2S3LQ2VIR3 472 aaKnown RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 WDR20Q8TBZ3 569 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CREB3L4Q8TEY5 395 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 CCNL2Q96S94 520 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 GJE1A6NN92 205 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ABCB7O75027 752 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 SOX30O94993 753 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 HOXB9P17482 250 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 S100A2P29034 98 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 FOLR3P41439 243 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 RIDAP52758 137 aaKnown RBP9.92□□□□□ -0.82
COL4A6-203ENST00000394872 DEFB133Q30KQ1 61 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 TIGD4Q8IY51 512 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 FTMTQ8N4E7 242 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 HORMAD2Q8N7B1 307 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
COL4A6-203ENST00000394872 A6NL46 340 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 HOXA11P31270 313 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ACTC1P68032 377 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ACTA1P68133 377 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 NIPAL4Q0D2K0 466 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 GRIN2CQ14957 1233 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 SYCE2Q6PIF2 218 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 SLC22A16Q86VW1 577 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 PDSS2Q86YH6 399 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 TRMT10AQ8TBZ6 339 aaKnown RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 LPAR4Q99677 370 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 LINC00597Q9H2U6 94 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF226Q9NYT6 803 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 A0A1W2PPK0 400 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 RFPL1O75677 317 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 APOL3O95236 402 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 UQCRC1P31930 480 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 OR4D1Q15615 310 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 Q6ZSR6 202 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 TTC9BQ8N6N2 239 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF675Q8TD23 568 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM40Q8WWA1 233 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 RFT1Q96AA3 541 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF285Q96NJ3 590 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ADAM18Q9Y3Q7 739 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ACY1Q03154 408 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF773Q6PK81 442 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 LARP4Q71RC2 724 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF367Q7RTV3 350 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 IL17RCQ8NAC3 791 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 HOXB13Q92826 284 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 BMFQ96LC9 184 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 MAP3K3Q99759 626 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 HCFC1R1Q9NWW0 138 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 NUP50Q9UKX7 468 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ANHXE9PGG2 379 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms