RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 TCEANCQ8N8B7 351 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 TP53I13Q8NBR0 393 aaPredicted RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 OR4D11Q8NGI4 311 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 OR5K2Q8NHB8 316 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 XAGE5Q8WWM1 108 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 MYDGFQ969H8 173 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 SLC35B4Q969S0 331 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 C1GALT1C1Q96EU7 318 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 DPEP2Q9H4A9 486 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 IMP3Q9NV31 184 aaKnown RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 GPR34Q9UPC5 381 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 PCDHGB6Q9Y5F9 930 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 SPTBP11277 2137 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 HYAL3O43820 417 aaPredicted RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 SOX6P35712 828 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 ATP6V1E1P36543 226 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 DEFA1P59665 94 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 DEFA3P59666 94 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 ZNF33BQ06732 778 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 SNAP47Q5SQN1 464 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 C10orf62Q5T681 223 aaPredicted RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 LACC1Q8IV20 430 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 LAX1Q8IWV1 398 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 OR4C15Q8NGM1 316 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 RELTQ969Z4 430 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 RAD51AP1Q96B01 352 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 CDADC1Q9BWV3 514 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 MCOLN1Q9GZU1 580 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 MKRN2Q9H000 416 aaKnown RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 EQTNQ9NQ60 294 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 NUFIP1Q9UHK0 495 aaKnown RBP13□□□□□ -0.33
CCDC142-202ENST00000393965 PADI2Q9Y2J8 665 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 STON1Q9Y6Q2 735 aa13□□□□□ -0.33
CCDC142-202ENST00000393965 C17orf113A0A1B0GUU1 675 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 TRBC2A0A5B9 178 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 CCRL2O00421 344 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 DSCR3O14972 297 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 FRS3O43559 492 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 OR1F1O43749 312 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 DUSP2Q05923 314 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 RUNX3Q13761 415 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 PARM1Q6UWI2 310 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 CEACAM20Q6UY09 585 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 PRSS48Q7RTY5 328 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 LRRTM4Q86VH4 590 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 HDDC3Q8N4P3 179 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 TBC1D20Q96BZ9 403 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 REPS1Q96D71 796 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 PPP1R16AQ96I34 528 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 TEFMQ96QE5 360 aaKnown RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 ANKMY1Q9P2S6 941 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 WBP11Q9Y2W2 641 aaKnown RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 IFT52Q9Y366 437 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 GUCY1B2O75343 617 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 TGFBR2P37173 567 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 SLC15A1P46059 708 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 RFX3P48380 749 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 HOXC5Q00444 222 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 KEAP1Q14145 624 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 METRNLQ641Q3 311 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 ZNF793Q6ZN11 406 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 C17orf64Q86WR6 236 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 NLGN4YQ8NFZ3 816 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 C12orf66Q96MD2 445 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 FYTTD1Q96QD9 318 aaKnown RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 FERD3LQ96RJ6 166 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 ASPNQ9BXN1 380 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 POLR2J2Q9GZM3 115 aaKnown RBP12.99□□□□□ -0.33
CCDC142-202ENST00000393965 KCNK12Q9HB15 430 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 PCDHGB3Q9Y5G1 929 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 NOX1Q9Y5S8 564 aa12.99□□□□□ -0.33
CCDC142-202ENST00000393965 PI15O43692 258 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 RB1P06400 928 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 ALOX5P09917 674 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 ACVR2AP27037 513 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 MAPK12P53778 367 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 TFF2Q03403 129 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 RUNX1T1Q06455 604 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 MAP4K2Q12851 820 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
CCDC142-202ENST00000393965 PYDC2Q56P42 97 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 SYT6Q5T7P8 510 aaPredicted RBP12.98□□□□□ -0.33
CCDC142-202ENST00000393965 LCTLQ6UWM7 567 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 ZNF765Q7L2R6 523 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 DCUN1D3Q8IWE4 304 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 SLC38A5Q8WUX1 472 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 MTERF3Q96E29 417 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 MS4A8Q9BY19 250 aa12.98□□□□□ -0.33
CCDC142-202ENST00000393965 ACER3Q9NUN7 267 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms