RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SPRY4Q9C004 299 aa22.74■■□□□ 1.23
LRFN4-202ENST00000393952 SLC26A1Q9H2B4 701 aa22.74■■□□□ 1.23
LRFN4-202ENST00000393952 SOX17Q9H6I2 414 aaPredicted RBP22.74■■□□□ 1.23
LRFN4-202ENST00000393952 IGKV3D-11A0A0A0MRZ8 115 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 VSTM2BA6NLU5 285 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 OR10H2O60403 315 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ALBP02768 609 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 CHI3L1P36222 383 aaPredicted RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 MC3RP41968 323 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 MRPS35P82673 323 aaKnown RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 MRPL14Q6P1L8 145 aaKnown RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 C6orf15Q6UXA7 325 aaPredicted RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ZNF517Q6ZMY9 492 aaPredicted RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 TMPRSS7Q7RTY8 843 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 TIPARPQ7Z3E1 657 aaKnown RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ULK2Q8IYT8 1036 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ST13P4Q8IZP2 240 aaPredicted RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ELP4Q96EB1 424 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 MAGED4Q96JG8 741 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 EPS8L2Q9H6S3 715 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 ANKRA2Q9H9E1 313 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 GPN3Q9UHW5 284 aaPredicted RBP22.73■■□□□ 1.23
LRFN4-202ENST00000393952 PCDHGA8Q9Y5G5 932 aa22.73■■□□□ 1.23
LRFN4-202ENST00000393952 SORBS2O94875 1100 aaKnown RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SOX18P35713 384 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 STT3AP46977 705 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 CCT3P49368 545 aaKnown RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 GABREP78334 506 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SERTAD2Q14140 314 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 ZNF628Q5EBL2 1059 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 PIGGQ5H8A4 983 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SAMD4BQ5PRF9 694 aaKnown RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 PGM2L1Q6PCE3 622 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 FAM111BQ6SJ93 734 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 ARHGAP24Q8N264 748 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 OR7G2Q8NG99 324 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 FAM120BQ96EK7 910 aaKnown RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 DGAT2Q96PD7 388 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SH3GL1Q99961 368 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 POLR1BQ9H9Y6 1135 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 PRORSD1PA6NEY8 169 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 CFAP73A6NFT4 308 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 C9J4A7 227 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 MGAT2Q10469 447 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 TMEM64Q6YI46 380 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 GPR155Q7Z3F1 870 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SZRD1Q7Z422 152 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 HPS6Q86YV9 775 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 C10orf111Q8N326 155 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 PLPP5Q8NEB5 264 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SFXN5Q8TD22 340 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 SPSB2Q99619 263 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 MMADHCQ9H3L0 296 aaPredicted RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 ZCCHC3Q9NUD5 404 aaKnown RBP22.72■■□□□ 1.23
LRFN4-202ENST00000393952 MAT2BQ9NZL9 334 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 CD300AQ9UGN4 299 aa22.72■■□□□ 1.23
LRFN4-202ENST00000393952 EVPLLA8MZ36 301 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 IDSB3KWA1 339 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 IFNA16P05015 189 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 CT62P0C5K7 136 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 PPIBP23284 216 aaKnown RBP22.71■■□□□ 1.23
LRFN4-202ENST00000393952 CASP9P55211 416 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 LIPEQ05469 1076 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 TP53BP2Q13625 1128 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 PRICKLE4Q2TBC4 344 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 SAXO2Q658L1 398 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 ANGPTL8Q6UXH0 198 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 FBXW8Q8N3Y1 598 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 FAM156AQ8NDB6 213 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 ZNF675Q8TD23 568 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 RBM18Q96H35 190 aaKnown RBP22.71■■□□□ 1.23
LRFN4-202ENST00000393952 CFAP54Q96N23 3096 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 RAB3IPQ96QF0 476 aaPredicted RBP22.71■■□□□ 1.23
LRFN4-202ENST00000393952 PIF1Q9H611 641 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 KAT8Q9H7Z6 458 aaKnown RBP22.71■■□□□ 1.23
LRFN4-202ENST00000393952 PADI1Q9ULC6 663 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 GMEB1Q9Y692 573 aa22.71■■□□□ 1.23
LRFN4-202ENST00000393952 TCRBV16S1A1N1A0A5B0 115 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 PLOD2O00469 737 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 EMC8O43402 210 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 KRT75O95678 551 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 HEXBP07686 556 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 GSK3BP49841 420 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 MVDP53602 400 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 EEFSECP57772 596 aaKnown RBP22.7■■□□□ 1.22
LRFN4-202ENST00000393952 NCF4Q15080 339 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 NSDHLQ15738 373 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 TRMT12Q53H54 448 aaKnown RBP22.7■■□□□ 1.22
LRFN4-202ENST00000393952 FAAH2Q6GMR7 532 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 C6orf120Q7Z4R8 191 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 IFNEQ86WN2 208 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 OR10A6Q8NH74 314 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 NEURL3Q96EH8 262 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 ECSITQ9BQ95 431 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 PELOQ9BRX2 385 aaKnown RBP22.7■■□□□ 1.22
LRFN4-202ENST00000393952 WDR54Q9H977 334 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 CXorf21Q9HAI6 301 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 C3orf14Q9HBI5 128 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 GPATCH2Q9NW75 528 aa22.7■■□□□ 1.22
LRFN4-202ENST00000393952 SLC7A8Q9UHI5 535 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms