RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 UTP15Q8TED0 518 aaKnown RBP17.34■□□□□ 0.37
SNCB-202ENST00000393693 CA5BP1Q8WTZ4 195 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 CDK15Q96Q40 435 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 RHBGQ9H310 441 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 TRIM45Q9H8W5 580 aaPredicted RBP17.34■□□□□ 0.37
SNCB-202ENST00000393693 NECTIN3Q9NQS3 549 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 ZNF225Q9UK10 706 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 SNX6Q9UNH7 406 aa17.34■□□□□ 0.37
SNCB-202ENST00000393693 CACNA1CQ13936 2221 aa17.33■□□□□ 0.37
SNCB-202ENST00000393693 TRBC2A0A5B9 178 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 SAGE2PA6NJ88 616 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 SLC28A1O00337 649 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 SLC22A2O15244 555 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 JUNP05412 331 aaKnown RBP17.33■□□□□ 0.36
SNCB-202ENST00000393693 GNAZP19086 355 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 CAPN3P20807 821 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 TRHRP34981 398 aaPredicted RBP17.33■□□□□ 0.36
SNCB-202ENST00000393693 SCTRP47872 440 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 HLCSP50747 726 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 RASSF2P50749 326 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 NR0B1P51843 470 aaKnown RBP17.33■□□□□ 0.36
SNCB-202ENST00000393693 HYAL2Q12891 473 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 BNIP1Q12981 228 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 CHIT1Q13231 466 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 QSOX2Q6ZRP7 698 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 SULF2Q8IWU5 870 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 MARVELD2Q8N4S9 558 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 NT5CQ8TCD5 201 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 TUBGCP3Q96CW5 907 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 NSL1Q96IY1 281 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 KLHL31Q9H511 634 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 MCCC2Q9HCC0 563 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 RNF11Q9Y3C5 154 aa17.33■□□□□ 0.36
SNCB-202ENST00000393693 A0A1B0GTL3 188 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 TCRBV16S1A1N1A0A5B0 115 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 C4orf51C9J302 202 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 UBDO15205 165 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 RGS14O43566 566 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 HS6ST1O60243 411 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 CDC40O60508 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNCB-202ENST00000393693 ULK1O75385 1050 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 TPOP07202 933 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 LINC00032P0C843 101 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 LBPP18428 481 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 PTGS2P35354 604 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 RGS1Q08116 209 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 XKR6Q5GH73 641 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 SPATA19Q7Z5L4 167 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 CD163Q86VB7 1156 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 ANKRD53Q8N9V6 530 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 FAM57AQ8TBR7 257 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 NEIL2Q969S2 332 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 TMEM125Q96AQ2 219 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 CCDC106Q9BWC9 280 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 DEFB126Q9BYW3 111 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 CAPN7Q9Y6W3 813 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 GTF3C1Q12789 2109 aa17.32■□□□□ 0.36
SNCB-202ENST00000393693 IGKV3D-11A0A0A0MRZ8 115 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 MANBAO00462 879 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 CDK2AP1O14519 115 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 TFECO14948 347 aaPredicted RBP17.31■□□□□ 0.36
SNCB-202ENST00000393693 PEX1O43933 1283 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 EPORP19235 508 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 GPR85P60893 370 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 STX1BP61266 288 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 LAPTM5Q13571 262 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 HIST2H2ACQ16777 129 aaPredicted RBP17.31■□□□□ 0.36
SNCB-202ENST00000393693 PAGE2BQ5JRK9 111 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 HIST2H2AA3Q6FI13 130 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 LARP4Q71RC2 724 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNCB-202ENST00000393693 ABHD13Q7L211 337 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 SLC5A11Q8WWX8 675 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 REPS1Q96D71 796 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 TREX2Q9BQ50 279 aaPredicted RBP17.31■□□□□ 0.36
SNCB-202ENST00000393693 AICDAQ9GZX7 198 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 TUBB1Q9H4B7 451 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 ELOVL6Q9H5J4 265 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 AKTIPQ9H8T0 292 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 PRDM9Q9NQV7 894 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 COQ3Q9NZJ6 369 aa17.31■□□□□ 0.36
SNCB-202ENST00000393693 ZNF490Q9ULM2 529 aaPredicted RBP17.31■□□□□ 0.36
SNCB-202ENST00000393693 TRBV11-1A0A0K0K1C0 115 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 PDE9AO76083 593 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 SMIM10L1P0DMW3 83 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 CALB2P22676 271 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 PRDX6P30041 224 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 CASP2P42575 452 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 ATP4BP51164 291 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 MNAT1P51948 309 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 SKP1P63208 163 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 SQLEQ14534 574 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 CPSF6Q16630 551 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNCB-202ENST00000393693 IMPG1Q17R60 797 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 SMU1Q2TAY7 513 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 CMPK2Q5EBM0 449 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 XKR7Q5GH72 579 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 C10orf62Q5T681 223 aaPredicted RBP17.3■□□□□ 0.36
SNCB-202ENST00000393693 GRHL2Q6ISB3 625 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 CHSY3Q70JA7 882 aa17.3■□□□□ 0.36
SNCB-202ENST00000393693 MDGA2Q7Z553 956 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms