RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TMPRSS11EQ9UL52 423 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SNX4O95219 450 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 RPL35P42766 123 aaKnown RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 PIN1Q13526 163 aaPredicted RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 LRIT3Q3SXY7 679 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 C10orf62Q5T681 223 aaPredicted RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 VN1R2Q8NFZ6 395 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 OR5P2Q8WZ92 322 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 RC3H2Q9HBD1 1191 aaKnown RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 ASIC5Q9NY37 505 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 MALT1Q9UDY8 824 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ENPP5Q9UJA9 477 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 CCL27Q9Y4X3 112 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 GREB1Q4ZG55 1949 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 A0A1W2PQU0 124 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SLC5A10A0PJK1 596 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 LRRC72A6NJI9 287 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 UPK1BO75841 260 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 IFNA16P05015 189 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 CSNK2A2P19784 350 aaPredicted RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 GADD45AP24522 165 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 RYKP34925 604 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ZFP36L2P47974 494 aaKnown RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 PUDPQ08623 228 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SLAMF1Q13291 335 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ZNF385BQ569K4 471 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 FAM78AQ5JUQ0 283 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 IQCHQ86VS3 1027 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 CDK20Q8IZL9 346 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 OR56A3Q8NH54 315 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 HERVK_113Q902F9 699 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SPRTNQ9H040 489 aaPredicted RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 SLC52A3Q9NQ40 469 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 KLHL1Q9NR64 748 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 B8ZZF3 427 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 M0R3H8 397 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 HOXC11O43248 304 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 PRAMEF4O60810 478 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 MTRF1O75570 445 aaKnown RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 IGHA2P01877 340 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 CTSEP14091 401 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 NT5EP21589 574 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 CPN2P22792 545 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 OR3A3P47888 321 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 P2RX3P56373 397 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 EIF4HQ15056 248 aaKnown RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 CST6Q15828 149 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 ZNF77Q15935 545 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 AGAP6Q5VW22 663 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 PRAMEF9Q5VWM5 478 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 IQCF1Q8N6M8 205 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 KCT2Q8NC54 265 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SRFBP1Q8NEF9 429 aaKnown RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 RERGQ96A58 199 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 AGAP4Q96P64 663 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 HOXD1Q9GZZ0 328 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 OR51I1Q9H343 314 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 PLSCR3Q9NRY6 295 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 ENPP4Q9Y6X5 453 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 CPSF4LA6NMK7 179 aaKnown RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 JRKO75564 520 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SLC35G6P0C7Q6 338 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 SOX9P48436 509 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 DCDC1P59894 354 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 RUNX3Q13761 415 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 BCL2A1Q16548 175 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 TMPRSS11AQ6ZMR5 421 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 PRSS48Q7RTY5 328 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SETD7Q8WTS6 366 aaKnown RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 ZBTB20Q9HC78 741 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 SNX7Q9UNH6 387 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 ING4Q9UNL4 249 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 ZNF236Q9UL36 1845 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 FRS3O43559 492 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 OR10H2O60403 315 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 MPZL2O60487 215 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 MPIP34949 423 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 HSD17B2P37059 387 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 KHKP50053 298 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 RHAGQ02094 409 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SCN1BQ07699 218 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 KEAP1Q14145 624 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 GPR68Q15743 365 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 MICAQ29983 383 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 ZNF311Q5JNZ3 666 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 NDUFAF5Q5TEU4 345 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 TMEM107Q6UX40 140 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 CACTIN-AS1Q8N1I8 211 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 FAM83FQ8NEG4 500 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 OR2L2Q8NH16 312 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.01□□□□□ -0.81
CALD1-203ENST00000393118 MAPKAP1Q9BPZ7 522 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 NMNAT1Q9HAN9 279 aaPredicted RBP10.01□□□□□ -0.81
CALD1-203ENST00000393118 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
CALD1-203ENST00000393118 SPATA6Q9NWH7 488 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms