RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 WWTR1Q9GZV5 400 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SLC17A7Q9P2U7 560 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ENTPD4Q9Y227 616 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SLC5A6Q9Y289 635 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ACTL7BQ9Y614 415 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 WASHC1A8K0Z3 465 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 TM9SF1O15321 606 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 RGS14O43566 566 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 OR6B1O95007 311 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 FGF4P08620 206 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 IL3P08700 152 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 ANXA4P09525 319 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-203ENST00000391855 SOX3P41225 446 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 MEOX1P50221 254 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 SRSF11Q05519 484 aaKnown RBP11.73□□□□□ -0.53
GGPS1-203ENST00000391855 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
GGPS1-203ENST00000391855 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 C4orf17Q53FE4 359 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 CEP85LQ5SZL2 805 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 HLA-DQA1Q5Y7H0 255 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 IL20RBQ6UXL0 311 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 IKBIPQ70UQ0 350 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-203ENST00000391855 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 C17orf47Q8NEP4 570 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 C16orf78Q8WTQ4 265 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 TP53INP1Q96A56 240 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 ERP27Q96DN0 273 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 PGM2Q96G03 612 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 GPR137Q96N19 417 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 GAL3ST4Q96RP7 486 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-203ENST00000391855 UTS2RQ9UKP6 389 aa11.73□□□□□ -0.53
GGPS1-203ENST00000391855 A0A1B0GUH1 482 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 CAPN14A8MX76 684 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ACOT7O00154 380 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 HRKO00198 91 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 PEX1O43933 1283 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SLITRK5O94991 958 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SNUPNO95149 360 aaKnown RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 UNC5CO95185 931 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 CLPSP04118 112 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 BPGMP07738 259 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 STSP08842 583 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 DDCP20711 480 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 MST1P26927 711 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SERPINB3P29508 390 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ETV4P43268 484 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 TMED10P49755 219 aaKnown RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ST13P50502 369 aaKnown RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 BTKQ06187 659 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 PRICKLE4Q2TBC4 344 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 KANK2Q63ZY3 851 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 CLEC6AQ6EIG7 209 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SCIMPQ6UWF3 145 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 RGS9BPQ6ZS82 235 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 GK5Q6ZS86 529 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SULF2Q8IWU5 870 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 CLYBLQ8N0X4 340 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ZFP62Q8NB50 900 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF675Q8TD23 568 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 UCN3Q969E3 161 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SPACA9Q96E40 222 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF681Q96N22 645 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 ZIM3Q96PE6 472 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 MECRQ9BV79 373 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 EBPLQ9BY08 206 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 OR10A5Q9H207 317 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 LIN28AQ9H9Z2 209 aaKnown RBP11.72□□□□□ -0.53
GGPS1-203ENST00000391855 MYNNQ9NPC7 610 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 MIEF1Q9NQG6 463 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 SACM1LQ9NTJ5 587 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 MAT2BQ9NZL9 334 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
GGPS1-203ENST00000391855 A0A1W2PS29 197 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 BIRC5O15392 142 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 BCAS2O75934 225 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 NADKO95544 446 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CREB1P16220 341 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 SSTR4P31391 388 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 FEN1P39748 380 aaKnown RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 SERPINB4P48594 390 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 NRG3P56975 720 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 PSPHP78330 225 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CEBPEQ15744 281 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 TNFAIP8L3Q5GJ75 292 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 ARL13AQ5H913 290 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 FAM219BQ5XKK7 198 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 NOXRED1Q6NXP6 359 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 MDGA2Q7Z553 956 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 SIAH3Q8IW03 269 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms