RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 VPS4BO75351 444 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 JUNP05412 331 aaKnown RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 PRPS2P11908 318 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 BCKDHAP12694 445 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 NTSP30990 170 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 MPIP34949 423 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 TNFSF10P50591 281 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 OC90Q02509 493 aaPredicted RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 FUT7Q11130 342 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 CEBPEQ15744 281 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 PRICKLE4Q2TBC4 344 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 VWA5B2Q8N398 1253 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 HORMAD2Q8N7B1 307 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 OR7G1Q8NGA0 311 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 NUBPLQ8TB37 319 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF764Q96H86 408 aaPredicted RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 EGLN2Q96KS0 407 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 PPP1R36Q96LQ0 422 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 BBS4Q96RK4 519 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 NUF2Q9BZD4 464 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 REEP4Q9H6H4 257 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 MEAF6Q9HAF1 191 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 TAS2R7Q9NYW3 318 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 MYOTQ9UBF9 498 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 EIF3LQ9Y262 564 aaKnown RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 YARS2Q9Y2Z4 477 aaKnown RBP13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 BOD1L1Q8NFC6 3051 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CNTRLQ7Z7A1 2325 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TTLL8A6PVC2 850 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 HRKO00198 91 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 HDAC3O15379 428 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 PRKNO60260 465 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 ITGA10O75578 1167 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 F10P00742 488 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CT62P0C5K7 136 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 SSTR4P31391 388 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TRHRP34981 398 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 HPCAL1P37235 193 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 RPL3P39023 403 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 SSR4P51571 173 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLC37A1P57057 533 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 EMX2Q04743 252 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 MAP4K2Q12851 820 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TUBA3CQ13748 450 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 PLEKHN1Q494U1 663 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 HSP90B2PQ58FF3 399 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 IL23RQ5VWK5 629 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 FAM180BQ6P0A1 224 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TUBA3EQ6PEY2 450 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 R3HCC1LQ7Z5L2 792 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CCDC116Q8IYX3 515 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 FAM9CQ8IZT9 166 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 LIX1Q8N485 282 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 TMEM156Q8N614 296 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 Q8NA96 180 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CATSPER1Q8NEC5 780 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CLHC1Q8NHS4 586 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF675Q8TD23 568 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 DOK4Q8TEW6 326 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 GFM2Q969S9 779 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 PPCDCQ96CD2 204 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 MTERF3Q96E29 417 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 C1orf50Q9BV19 199 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 EPN3Q9H201 632 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 AKTIPQ9H8T0 292 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 ASIC5Q9NY37 505 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 MAT2BQ9NZL9 334 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 NOP53Q9NZM5 478 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 MARCOQ9UEW3 520 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 BAIAP2L1Q9UHR4 511 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 EXO1Q9UQ84 846 aaKnown RBP13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 CFL2Q9Y281 166 aa13.96□□□□□ -0.17
IGHV3-53-201ENST00000390627 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 AKAP10O43572 662 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 TBX19O60806 448 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 PRAMEF2O60811 474 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 SLITRK5O94991 958 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 LRATO95237 230 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 KITP10721 976 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 CD96P40200 585 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 CYB561P49447 251 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 HLCSP50747 726 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 DUSP2Q05923 314 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 EBPQ15125 230 aaKnown RBP13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 OR1C1Q15619 314 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 LTB4RQ15722 352 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 MPEG1Q2M385 716 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 GPALPP1Q8IXQ4 340 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 ADCY4Q8NFM4 1077 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 PIWIL2Q8TC59 973 aaKnown RBP13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 CTHRC1Q96CG8 243 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 ERP27Q96DN0 273 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms