RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 D6RAR5 112 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 E9PSI1 815 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 G3V3Q6 166 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 K7EQZ3 153 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SGK1O00141 431 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 AGRPO00253 132 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OR7A17O14581 309 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SCAMP1O15126 338 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SURF4O15260 269 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 INPP4BO15327 924 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ADAM20O43506 726 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RGS10O43665 173 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RRP9O43818 475 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SNX2O60749 519 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RASAL1O95294 804 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 XBP1P17861 261 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 GPR4P46093 362 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OR3A2P47893 321 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NEK3P51956 506 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EIF6P56537 245 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IL5RAQ01344 420 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 AMPD3Q01432 767 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OTUD4Q01804 1114 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ACSM1Q08AH1 577 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TAF10Q12962 218 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SQLEQ14534 574 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 FSCN1Q16658 493 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DECR1Q16698 335 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 KNOP1Q1ED39 458 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ATP1A1-AS1Q5TC04 95 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 AADACL4Q5VUY2 407 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TMEM88Q6PEY1 159 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CCDC81Q6ZN84 652 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RASGEF1CQ8N431 466 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RASSF8Q8NHQ8 419 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ACTL9Q8TC94 416 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HNRNPLLQ8WVV9 542 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TNPO1Q92973 898 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EXOSC8Q96B26 276 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RNF125Q96EQ8 232 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RNFT2Q96EX2 444 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CLPTM1LQ96KA5 538 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PRRC1Q96M27 445 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ERMAPQ96PL5 475 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SH3GL2Q99962 352 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 VRK1Q99986 396 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZNF436Q9C0F3 470 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ABCG5Q9H222 651 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SLC26A1Q9H2B4 701 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ITM2CQ9NQX7 267 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MPP6Q9NZW5 540 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZNRD1Q9P1U0 126 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OSGIN1Q9UJX0 560 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PNMA8BQ9ULN7 279 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RNF24Q9Y225 148 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RRP7AQ9Y3A4 280 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PCDHB7Q9Y5E2 793 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EID1Q9Y6B2 187 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TMEM14AQ9Y6G1 99 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IQSEC2Q5JU85 1478 aa-2.73□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PLCE1Q9P212 2302 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CSMD2Q7Z408 3487 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TRAV20A0A0B4J274 112 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IGHV3-66A0A0C4DH42 116 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 A0A1B0GWJ7 208 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZNF726A6NNF4 738 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EFCAB7A8K855 629 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RNF212BA8MTL3 300 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 B2RBV5 119 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 H0YAA0 97 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 H7C0S8 307 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TEX28O15482 410 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 KDM1AO60341 852 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ENTPD3O75355 529 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MTRF1O75570 445 aaKnown RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZRANB2O95218 330 aaKnown RBP eCLIP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ETHE1O95571 254 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 AHSGP02765 367 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CYC1P08574 325 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PEPDP12955 493 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ATP2A2P16615 1042 aaKnown RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HSPA6P17066 643 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HOXB9P17482 250 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SRD5A1P18405 259 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CDH2P19022 906 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HRH2P25021 359 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PTGER4P35408 488 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 GARSP41250 739 aaKnown RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 LGALS7P47929 136 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SLC11A1P49279 550 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SERPINB9P50453 376 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PPP2R5CQ13362 524 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HERC3Q15034 1050 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PDK1Q15118 436 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TERF2Q15554 542 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NNATQ16517 81 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 KHDC1Q4VXA5 237 aaKnown RBP-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ESCO2Q56NI9 601 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 AADACL2Q6P093 401 aa-2.74□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DUS1LQ6P1R4 473 aaKnown RBP-2.74□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms